Roseburia intestinalis XB6B4: RO1_39770
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Entry
RO1_39770 CDS
T02597
Name
(GenBank) Transcriptional regulators
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
rix
Roseburia intestinalis XB6B4
Brite
KEGG Orthology (KO) [BR:
rix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rix03000
]
RO1_39770
Transcription factors [BR:
rix03000
]
Prokaryotic type
Helix-turn-helix
LacI family
RO1_39770
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
TetR_N
HTH_3
HTH_31
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
CBL14185
UniProt:
D4L3J5
LinkDB
All DBs
Position
3946609..3947625
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AA seq
338 aa
AA seq
DB search
MANVTMRDIAEKLGVSIVSVSKALTGKEGVSEELREKVKKEADRLGYRYNLGAKGLKEGR
NYNVGVIIPSYYTDDTSNAFYMKMYQCVAKCLTNYDYATMLELVDTRMQEMMILPQIVGD
NRLDGLILMGELDETYLKRLKQMNIPMIYMDFYDLSMETDSVSMDNISAEYKMTEYLIEL
GHKKIAYVGSINATTSIMDRYLGYRRALHHYNILYREDYLIEDRGEDRLFKELALPEDMP
TAFVCNNDEIACILIEKLEKMGYSVPEDISVTGFDNYPFIRRNASGLTTVDVDIAMMASE
GVELLLERLNDKRETFVRRVVSGHIVIRKSTGKAATEP
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacgtgactatgcgtgatattgcggaaaagctgggagtcagtatcgtctccgtg
tcgaaagcactcacgggaaaagaaggagtcagtgaggaacttcgtgaaaaagtaaaaaag
gaagccgacaggcttggatatcgttataacctcggagcaaagggtcttaaggagggaaga
aactataatgttggtgtaatcattccttcctactatacagatgacacgagcaatgcattt
tatatgaaaatgtaccagtgtgttgcaaaatgcctgaccaattacgattatgcgacgatg
ttggaactggtggatacgaggatgcaggaaatgatgatcctgccgcagattgtgggggat
aacaggctggatggactgattctgatgggagagttagacgagacatatttaaaaagatta
aaacagatgaatattccgatgatctacatggatttttatgatctctccatggagacggat
tctgtcagcatggataatatcagcgcggaatacaagatgacggagtatttaattgaactt
ggacataaaaagatcgcctatgtcggttcgatcaatgccactacgagcattatggatcgt
tatttaggatatagaagggcattacatcattataatatcctatatcgcgaggattatctg
attgaggacagaggtgaggacagactttttaaagaactggctctgccagaggatatgccg
acggcatttgtctgtaacaatgatgaaattgcctgtatcctgatcgaaaaattagaaaaa
atgggatacagtgtgccggaggatatatcggtcacagggtttgacaattatccgtttatc
cgacgcaatgcgtcgggactcacgactgtggatgtggatatcgcgatgatggcgtccgag
ggcgtggagcttttgttagaacgcctcaatgataaacgggaaacatttgtgagacgtgtc
gtaagcggacatattgtgatccggaaatcgactgggaaagcggcgacagagccgtaa
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