Roseburia intestinalis XB6B4: RO1_41460
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Entry
RO1_41460 CDS
T02597
Name
(GenBank) penicillin-binding protein, 1A family
KO
K18770
penicillin-binding protein 4 [EC:
2.4.99.28
3.4.16.4
]
Organism
rix
Roseburia intestinalis XB6B4
Pathway
rix00550
Peptidoglycan biosynthesis
rix01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rix00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RO1_41460
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rix01003
]
RO1_41460
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rix01011
]
RO1_41460
Enzymes [BR:
rix01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
RO1_41460
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RO1_41460
Glycosyltransferases [BR:
rix01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
RO1_41460
Peptidoglycan biosynthesis and degradation proteins [BR:
rix01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
RO1_41460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
PAT1
Motif
Other DBs
NCBI-ProteinID:
CBL14325
UniProt:
D4L3Y5
LinkDB
All DBs
Position
4108197..4110509
Genome browser
AA seq
770 aa
AA seq
DB search
MFWFFAKMQLVLLLAVIAGACWYYFGGYAEEVKDLKTQAIELVRHSSKETFKANQTSIVY
ASDESVISTLKGGKDSYYLSITDMPSNVECAIVSIEDKKFFRHNGIDYRALLRAVKAMIE
NGEATQGGSTITMQLARNIFLSQEKTWQRKVEEMYIARELEKKYTKDEILEFYLNNIYFG
NGYYGIQSASRGYFNRDVQDLDLSEQAFLCAIPNNPTLYDPLTNITNTYKRRNRILKNML
DDGKISKTAYENALGEVMALDRPETLAKNDYVETYTYYCAARALMETEDFQFKYQFSSED
EKNKYDEAYETLYSECQKKLYTAGYRIYTSFDLNLQQELQDTVNEALAGYTEVNDEGVYA
LQSAAVCIDNDNGYVRAIVGGRSQDFSGYTLNRAFQSYRQPGSAIKPLIVYTPSFERNYT
PDSVVTDEPIEDGPRNANGSYSGQITVRTAVEKSVNTIAWKLYEELTPEVGLSYLEKMNF
AKLDANDYRPATALGGFTNGVSALEMASGYAAIENDGNYRAPTCIVKILDADGNEIYASA
QTEEAVYKQNAARMMTDILKGVITSGTAHGLGLGSMPAAGKTGTSNDQKDGWFVGYTRYY
TTSVWVGYDMPKKMDKLMGSTYPGTIWQKFMLKAHEGRSPMEFLPYAQVSDEVHTFHQED
TEENPDQNADENAGQQDQNQQQQDQQQPQNQQQQDQQQPQEQQQQQQEQQQQQQQDQQQQ
QDQQQDQQQQDQQQDQQQQDQQQEQQQQQQQDQQQQQDQQQDQQQQDQQQ
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgttctggtttttcgcaaagatgcagctggtgctgctgcttgcagtcattgcaggggca
tgctggtattattttggcggttacgcggaagaagtaaaagacttaaagacgcaggcaata
gagctggtgcgccattccagcaaggaaacatttaaggcaaatcagaccagtatcgtctat
gcttcggatgaaagtgtaatctccacattaaaaggcggaaaagattcttattatctttcg
attacagatatgccgagtaatgtagagtgtgctatcgtcagtatagaggataaaaagttt
ttccggcataacggaattgactaccgggcgcttttgcgtgcggtaaaggcaatgattgaa
aatggagaggcaacacagggcggcagtacgatcacaatgcagcttgcgcgaaatattttt
ttgagccaggaaaagacatggcagagaaaggttgaggaaatgtatatcgcgcgggaactc
gaaaagaagtacaccaaagatgagattcttgaattctatcttaataatatttattttgga
aacggatactatgggatccagtcggcaagccgtgggtattttaaccgggatgtgcaggat
cttgatctgtcggagcaggcatttttgtgtgcgataccaaataatccgacgctctatgat
ccacttacgaatatcacgaacacatacaagagaagaaaccgtattttgaaaaatatgctc
gatgatgggaaaatttccaaaacagcatacgaaaatgcactgggtgaggtgatggcgtta
gaccggccggaaacactggcaaaaaatgattatgtggagacctatacctattattgtgca
gccagggcattgatggaaacggaggatttccagtttaaatatcagttttcctcggaagat
gaaaaaaacaaatatgacgaagcttatgagacgctgtacagtgagtgtcagaaaaagctg
tatactgcgggctaccggatctatacgtcatttgacctgaacttacagcaggaactgcag
gatacggtaaacgaggcactcgccggttacacggaggtcaatgatgagggcgtgtatgcc
ttgcagtcggcagcagtctgtattgacaatgacaatggctatgtcagggcgatcgtgggc
ggaagaagccaggatttctccggttatacgttaaaccgtgcatttcagagttaccgtcag
ccgggcagtgccattaagccgctgatcgtatatacaccatcttttgagcgcaattatacg
ccggactctgtggtgacagacgagccgatcgaggatggaccaaggaatgcaaatggttcc
tattccggtcagatcacagtccggacggctgtggagaagtctgtcaatacgatcgcatgg
aaattatatgaggagctgactccggaagtcggtctttcttatcttgaaaaaatgaatttt
gcaaaactggatgccaatgactacagaccggcaacggcacttggaggttttacaaacggt
gtgtctgcgcttgagatggcgtccgggtatgcagcgatcgaaaacgatggaaattaccgg
gcaccgacctgtattgttaagatattagatgcggatggcaatgaaatctatgcatctgca
cagacggaagaggctgtgtataagcagaatgcggcgcgtatgatgacagatattttaaaa
ggtgttatcacgagcggaacggcacacggacttggtcttggcagtatgcctgcagccgga
aagacaggtacatccaacgaccagaaggacggatggtttgtgggatatacgagatattac
acgacgagtgtctgggttggttatgatatgccgaaaaaaatggataaactgatgggatct
acttatccgggcacgatctggcagaagtttatgttaaaggcacatgaaggacgttctccg
atggaatttttaccgtatgcgcaggtatcggatgaggttcatacattccatcaggaagat
acggaggagaatccggatcagaatgcggatgaaaatgccgggcagcaggatcagaatcag
cagcaacaggatcagcagcaaccacagaaccagcagcaacaggatcagcagcaaccacag
gaacagcagcaacagcagcaggagcagcaacagcaacaacagcaggaccaacaacagcaa
caagatcagcagcaggaccaacagcaacaagatcagcagcaggaccaacagcaacaagat
cagcagcaggagcagcaacagcaacaacagcaggaccaacaacagcaacaagatcagcag
caggaccaacagcaacaagaccaacagcagtga
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