Rickettsia finnyi: ACE5D9_01760
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Entry
ACE5D9_01760 CDS
T11691
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
riz Rickettsia finnyi
Pathway
riz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
riz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACE5D9_01760 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
riz03021
]
ACE5D9_01760 (rho)
03019 Messenger RNA biogenesis [BR:
riz03019
]
ACE5D9_01760 (rho)
Transcription machinery [BR:
riz03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ACE5D9_01760 (rho)
Messenger RNA biogenesis [BR:
riz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACE5D9_01760 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
ATPase_2
AAA_22
OB_RNB
Fungal_virus_P2_C
Spore_III_AA
S1CSD-TOTE-2
NACHT
AAA
Mor
Motif
Other DBs
NCBI-ProteinID:
XIA57423
LinkDB
All DBs
Position
895047..896423
Genome browser
AA seq
458 aa
AA seq
DB search
MNTTNKESTAELNNTESNNNYNNFAENGNIINLKQLKRKLPEELQAQAEELKIENINSLL
KQELVFAILKKSVEQGGLIVGEGVLEVLPDGFGFLRSPEVNYLAGPDDIYISPSQIRRFG
LRTGDTVEGQIRAPKAGERYFALLKVNRVNFEDPSKAYHRVHFDNLTPLYPDEKLGLELE
NNSKDSKDFSTRVIELVAPMGKGQRALIVAPPRTGKTVLLQNIAHAITTNNPEVFLIVLL
IDERPEEVTDMQRSVRGEVVSSTFDEPASRHVQLAEMVIKKAKRLVEHKKDVVILVDAIT
RLARAYNTVVPSSGKVLTGGVDANALQRPKRFFGAARNIENGGSLTIIGTALIETGSRMD
EVIFEEFKGTGNSEIVLDRKIADKRIYPAIDITRSGTRKEDLLVDKIILNKMWVLRRIID
PMGSSEAIEFLLKKLENTKTNGEFFEMMKSPERPKNGL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaacacaactaataaagaatccacagcagaacttaacaataccgaatccaataacaat
tataataattttgcagagaacggtaatattattaatttaaaacaattaaaacgtaaatta
ccggaggaactacaagctcaagcagaagaattaaaaattgaaaatattaattcattactt
aaacaagaattagtttttgcaattttgaaaaaatccgtagagcagggaggtttaatagtg
ggagagggggtacttgaagtactacctgacggatttggttttttacgttcgccggaagta
aactacttagcaggccctgatgatatttatatttctcctagtcagattcgtcgctttggt
ctgcgtaccggcgatactgtagaaggtcagatcagagctccaaaagccggagaacgttat
tttgctttactgaaagtcaatagagtaaattttgaagacccttctaaagcttatcatcgt
gttcattttgataatttaacccccttatatcctgatgaaaaattaggattagaacttgaa
aataatagtaaagatagtaaggattttagtacacgggttattgaacttgtggctcctatg
ggtaaaggacaacgtgcattaatagtcgcaccgcctcgtacaggtaaaaccgtattatta
caaaatatagcacatgcaattacaaccaataatccggaagtatttttaatagtactgtta
atagacgaaagacctgaagaagtaaccgatatgcaacgttctgtgcgtggggaggttgtt
agctctactttcgatgaaccggcaagcaggcacgtgcagcttgcagaaatggttatcaaa
aaagcaaagcgtttagtagaacataaaaaagacgtggtaattttagtagatgcgataaca
cgtttagctcgtgcttataatactgtagtgccgtcatcaggtaaagtattaacgggcggt
gttgatgctaatgctcttcagagacctaaaagatttttcggagcagcaagaaatattgaa
aacggcggttcgcttactataatcggtacggctttaattgaaactggttctcgtatggat
gaggtaatttttgaggagtttaaaggtacaggtaattccgagatagttctcgatcgtaag
attgccgataagcgtatttatccggctattgatataactagatcaggaactagaaaagaa
gatttattagtagataaaataatattaaataaaatgtgggttcttcgtcgtattatcgat
ccgatgggtagcagtgaagcaatagaatttttactcaaaaaacttgaaaatactaaaact
aacggtgagttttttgagatgatgaagagtcctgaacgtcctaagaacggtctatag
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