Rickettsia sp. 2024-CO-Wats: ACE5D9_04445
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Entry
ACE5D9_04445 CDS
T11691
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
riz Rickettsia sp. 2024-CO-Wats
Pathway
riz03030
DNA replication
riz03430
Mismatch repair
riz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
riz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACE5D9_04445 (dnaE)
03430 Mismatch repair
ACE5D9_04445 (dnaE)
03440 Homologous recombination
ACE5D9_04445 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
riz03032
]
ACE5D9_04445 (dnaE)
03400 DNA repair and recombination proteins [BR:
riz03400
]
ACE5D9_04445 (dnaE)
Enzymes [BR:
riz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACE5D9_04445 (dnaE)
DNA replication proteins [BR:
riz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACE5D9_04445 (dnaE)
DNA repair and recombination proteins [BR:
riz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACE5D9_04445 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
XIA56697
LinkDB
All DBs
Position
complement(69433..72954)
Genome browser
AA seq
1173 aa
AA seq
DB search
MRPEFIHLRTQSSYSFLESALTIEKVVELASSNKMPAICLADKGNLFGSLEFALYAIKKG
LQPIHGVILNIKYDIDIFAQILLIAKDETGYKNLLKLSSLTFTKNDRKICDHIDFEDLIE
YQEGLIGLCCYTDGIVGQCLLARNEEQAMLFARKLQEILGDRFYFEIMRHELPEEQFIED
SYIRIAAELAIPLVATNKVLFSEKSMHDAHDVLLCISAGVTKEYLDRKTVSENCYFRSPH
EMIELFSDLPSAIQNTVNLRERCYFAAHPNPPMLPNFATKDISETDLIRKDAKEGLLARL
ATKFKSENISLENQEEVKTEYFARLNYELDIICNMNFAGYFLIVSDFIKWSKKEGILVGP
GRGSGAGSVVAWSLLITDLDPIKFGLLFERFLNPERISMPDFDIDFCQERREEVINYVRS
KYGNNRVGQIITFGKMQAKAVIKDVARVLSLPYKFADYLTELVPFSAVNPVSLEQAMREV
PELANAAKGNGLYNLDGEAELIKLVLDTSLILEGLHRHSSTHAAGIVIAGTDLVDIVPVY
KDANSDMLVVGYSMKYAEIAGLIKFDFLGLQTLTVITDCKKLLKEQGIEVDFNNMTFDDN
KTYQMLCKGKGVGVFQFESIGMKDALRRLKPDSIHDLIALGALYRPGPMENIPTYIACKH
KLQQPDYLHELLKPILEETYGVVIYQEQVQRIAQVLAGYTLGAADLLRRAMGKKIKKEME
EQEEIFVKGAVANNISESQAKSIFATVAKFAGYGFNKAHAASYGVISYQTAYLKANYPTE
FLVACLNLELNNHDKINLFLQEAKDNGIKITAPNINISEGYFSVKFSDTVIPRLDRGIQE
ISKDTVVKPRYDIAGAIIFALGAIKGVTPNFGKLVTDERKARGAFKSITDFIERLPPKSI
NSKLLENLIKSGCFDELHDNRLQLLSSIPKLLSYSTSYHEEQESNQLSLIKISSLSPTIL
VSSDYADKNTLAFYEFEAMGLFISNHPLTEYQEIFSRLNILNTADLHNNLPDGTNRVNLA
GVIQKKDSRMSARGRFVTLVLSDPENIFELSIFSEEVLKDYVHLLDVKSLVVVDCDIVKD
EGGIKLTAKSFSSIEDAINNKQFELQFYPQNHEELRQIVTLLAARINNEDQSNAKATIYL
QSADVKNFVAKITLPEKFLLQGQDFEILKGYSK
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgcgacctgaatttattcatttaagaactcaaagctcttattcttttctagaaagtgca
ttaacgattgagaaggtagtagaacttgcttcatcgaataaaatgcctgctatttgtttg
gcagataagggaaatttattcggctcattagagtttgcattatatgcaataaaaaaggga
ctgcagccgatacacggagttattctaaatataaaatacgatatagatatttttgctcaa
attttgcttatagctaaagatgaaactggctataaaaatttactcaaactatcaagcctt
acttttactaaaaatgatcgtaagatatgcgatcacattgattttgaagatttaatcgaa
tatcaagaaggattaataggattatgctgttataccgacggtattgtcgggcaatgcttg
ctagctcgcaacgaggaacaagcgatgctgtttgcacgtaaattacaggaaattttagga
gatcgtttttactttgagattatgagacatgagctaccggaagaacagtttattgaggat
agttatattagaattgctgccgagcttgctattccgcttgttgctactaataaagttttg
tttagtgagaaaagcatgcatgatgcacatgatgtattgttatgtatatcagccggtgtt
actaaagaatatctggatcgaaaaacagttagtgaaaattgttattttaggtcaccgcat
gagatgatagagcttttttccgatttacctagtgccatccaaaataccgtgaatttaaga
gagcgttgttattttgccgcacatccaaacccgccgatgctgcctaattttgccaccaaa
gatattagtgaaacggatttaattagaaaagatgcaaaagaagggttgcttgcaaggctt
gctacaaagtttaaatctgaaaatatttcgttagagaatcaagaagaagtaaaaaccgaa
tattttgctcgtcttaattatgagctggatattatctgtaatatgaattttgccggttat
tttttgattgtatctgattttattaaatggagtaaaaaagagggtattttagtcggacca
ggtagaggatcgggagcaggttcggttgttgcttggagcttgcttattactgatctcgat
ccgattaaatttggcttattatttgaaagatttttaaatcctgaacgtatttcaatgcct
gattttgatattgatttttgtcaggaaaggcgtgaggaagtaattaattacgtacgttcc
aaatacggtaataatagagtaggacagattataactttcggtaagatgcaggcaaaggct
gtaattaaggatgtcgctcgtgtgcttagcttaccttataaattcgctgattatctaacg
gagcttgtcccttttagtgcagttaatccagttagcttagaacaggcaatgcgtgaagtc
ccggagcttgcaaatgccgctaaaggtaatgggttgtataatttagacggtgaagcggag
ttaattaagctagtgcttgatacttcgttaattcttgaggggctgcataggcattcctca
actcatgctgcaggaatcgtaatagcaggtactgatttagtcgatatagtaccggtatat
aaagatgctaactccgatatgctggtagtcggttattctatgaaatatgccgagattgcc
ggtttaattaaatttgattttttagggctacaaaccctaacggttattaccgattgtaag
aaactgcttaaagagcaagggatagaagtagattttaacaatatgacgtttgatgataat
aagacttatcaaatgttgtgtaaaggtaaaggagtcggcgttttccaatttgaaagtatc
gggatgaaagatgcacttagacgccttaaacctgattctatacatgatttgatagctctt
ggtgcgttataccgtcctggtcctatggaaaatattcctacctatatagcttgtaagcat
aaattacaacagcctgattatttacatgagctattgaagccaatcttagaagaaacttac
ggcgtggtgatatatcaggagcaggtacaaagaattgctcaggttcttgcaggttatacg
ctaggagctgccgatttacttcgtagagcaatgggtaagaagataaaaaaagaaatggag
gagcaggaagaaatttttgttaaaggagcagttgctaataatatttcggaatctcaagct
aaatccatttttgcaaccgtggctaaatttgctggatacggttttaataaggcacatgct
gcgtcttacggtgttatttcataccaaactgcatatcttaaagctaattatcctactgaa
tttttagtagcatgcttaaatcttgaattgaataatcacgataaaattaatttattttta
caagaagcaaaagataacggcataaaaattactgcacctaatattaatatttctgaaggg
tattttagtgtaaagttttcggacactgtcatcccgcgacttgatcgcgggatccaggaa
atttcaaaagatactgtggtcaagccacggtatgacatcgcgggtgcaataatcttcgct
ttaggtgctattaagggagtcacgccgaatttcggtaagttagtaacggatgagcgaaaa
gcaagaggggcgtttaaatcaattactgattttattgaaagattaccccccaaatctatt
aacagtaaattattggaaaatttaatcaagtcaggctgttttgatgagctgcatgataat
cgattgcaattattgtcaagcattccaaaattgctttcttattcaacttcatatcacgaa
gagcaggaatctaatcaattgagcttaattaaaatttctagtttaagtccaactatttta
gtatcaagcgattatgccgataaaaatactttagccttttatgaatttgaggctatgggt
ttatttatctctaatcatcctcttacggaatatcaagaaatatttagtcgtttaaatatt
ttaaatactgcggatttgcataataacttacctgatggtactaaccgagtaaatcttgcc
ggtgtaatacaaaaaaaggattctcgtatgtcggcaagaggtaggtttgtgacgctcgtg
ctttccgatcctgagaatatctttgaacttagtatttttagtgaggaagttttaaaagat
tatgtacatttgcttgatgttaaaagtttggtagttgttgattgtgacatagttaaagat
gagggaggaataaaactaacggcaaaaagcttttcatcaattgaggatgcaattaataat
aaacaatttgaactacagttttatccacaaaatcatgaagaattacggcagatagttacc
ttgcttgcagctcgtataaataacgaagatcagagtaatgctaaagctacaatctattta
caaagcgcagatgtaaagaattttgtagcaaaaattacattacctgaaaaattcttactc
caagggcaagattttgagattttaaaaggatatagtaaatag
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