Rickettsia japonica: RJP_0177
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Entry
RJP_0177 CDS
T01637
Symbol
hupA
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
rja
Rickettsia japonica
Brite
KEGG Orthology (KO) [BR:
rja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rja03032
]
RJP_0177 (hupA)
03036 Chromosome and associated proteins [BR:
rja03036
]
RJP_0177 (hupA)
03400 DNA repair and recombination proteins [BR:
rja03400
]
RJP_0177 (hupA)
DNA replication proteins [BR:
rja03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
RJP_0177 (hupA)
Chromosome and associated proteins [BR:
rja03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
RJP_0177 (hupA)
DNA repair and recombination proteins [BR:
rja03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
RJP_0177 (hupA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
Phage_int_SAM_4
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
BAK96398
UniProt:
G4KM90
LinkDB
All DBs
Position
228766..229185
Genome browser
AA seq
139 aa
AA seq
DB search
MMYIIASCIYCFIKKHQYILTYQRRIDFIMSTHNKKEPKKMNKTEFIAFMTDHGHNHKHA
SHKTLTKAEAEKALNLVLDSVISAIKSHHNINITGFGSFEIHHRKAREGRNPKTGAKMKI
DAYNQPTFRAGRKMKEACN
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
ttgatgtatattattgccagttgtatatattgttttataaaaaaacatcaatacatatta
acctatcaaaggagaattgattttattatgagtacacataacaaaaaagaaccaaaaaaa
atgaataaaaccgaatttatagcatttatgaccgaccatggtcataatcataaacatgct
tcacataaaacattaacaaaagctgaggccgagaaagcactgaatttagttcttgatagt
gtgattagtgctataaagagtcaccataatattaatataacaggtttcggttcatttgaa
atacatcatagaaaagcacgtgagggtcgtaacccaaaaactggagcaaaaatgaaaata
gatgcttacaatcaacctacttttagagccggaagaaaaatgaaagaagcttgtaattaa
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