Rickettsia japonica: RJP_0434
Help
Entry
RJP_0434 CDS
T01637
Name
(GenBank) recB family exonuclease
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
rja
Rickettsia japonica
Brite
KEGG Orthology (KO) [BR:
rja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rja03400
]
RJP_0434
Enzymes [BR:
rja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RJP_0434
DNA repair and recombination proteins [BR:
rja03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
RJP_0434
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
BAK96648
UniProt:
G4KMZ0
LinkDB
All DBs
Position
complement(549098..551614)
Genome browser
AA seq
838 aa
AA seq
DB search
MTADYSFLKSFAEYIIDKLGKDTEVQIILPNNFSCLELKKILTDKYKIKLPIIIPFNSLI
SKKTDSDYISKIEELLILSSIITEYKELPFNKNESLKAAEFLRKLFNDLIINNIDIKLIE
VYNNSNYWQKIYKFLAYCFLRWQEEISFTQKQTKAVYKLKLLQEEIIKIKTGHKQVILAG
IFKPNVFLKRFEEELKDYIIHYNPASKQISYGISYYEPNDIYEETKQIAYICSRNKDRRI
AIVTNNNKLKRVYCNFLDKYEDLLGNDLRLTNIGELLTSIIKILCNNFDLKLLFLLLKNP
LINCPTVQQLELMLSNKNRFISSPKYLLQLQFDNEDIREYCRNLIDILFTDTPHNIQAIL
TLTKEITEKLLPTIWEKEGGAELLEFLTKLTIYSKYVNSTDKKDFPKIFSFLLSNIKYYK
NTDAASIIIGRPEDLALCEFDLIILPHFNNENWTLSAKAHPWLSKKALQILNIDYDEIAP
TLYSDYFNLFLQNKQIVILNAKKYDGKLSVPSNLFLKLEKGSVSPRDLITGSSNYMDTVV
KPRYDKSIEIHSPSFPTTLSVTEIETLIRNPYGFYAKKILGLRKKDHIWEEPKISDFGHL
IHKVLEEYSKNYDKQYINLNLLDKQNALINIGNHILYSTILPSYTKKTWQIKLMAFSKAF
ILFDIERRKNCKEIYFETKGELRLNIVGQDIKIIGIADRIEISKSNNITILDYKTGTIPT
KKEIELGLSPQLIIESLMLLENGFTKCNSLSLLCHPQPLLCYSCESGNPVMNNNITIAYV
KITSTEPYVHTTEIALSIETLNRHKAGLVKLLEHYITNQFFSYDLNLSKYNDYLHLSR
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgattattcttttttgaaaagttttgctgagtatatcattgataaattaggt
aaagatacagaagttcaaataatattgcctaataatttctcatgcctagaattaaagaag
attttaaccgataaatataaaattaaattacctattattattccttttaattctcttatt
tcaaaaaaaaccgattcggattatatatctaaaatagaagaattacttattttatcatcc
attatcaccgaatataaagaattaccttttaataaaaatgaatcattaaaagctgcagaa
tttttaagaaaattgtttaatgatcttataatcaataatatcgatataaaattaattgaa
gtctataacaattctaactattggcaaaagatttataaatttctagcatattgcttttta
agatggcaagaagaaatatcgtttactcaaaaacaaactaaagcagtttataaattaaag
ctattacaagaagaaataataaaaataaaaacgggacataagcaggtaatactcgctgga
atattcaagcctaatgtttttttaaaaagatttgaagaagaattaaaagattacataatt
cactataatcctgcctccaaacagattagctatggtatatcttattatgaacctaatgac
atttatgaagaaactaaacaaatagcttatatatgtagccgtaataaagacagacggatt
gcaatcgttacaaataataataagcttaaaagagtatattgtaattttttagacaaatat
gaagatctactaggtaatgacttaaggcttactaatataggtgaattactaacttccatt
attaaaatattatgtaataattttgatttaaaacttctatttttattacttaaaaatcct
ttaattaactgccctactgtgcagcagttagagttaatgctatctaataaaaaccgtttt
atatcctcaccgaaatatttattgcaattacaatttgataatgaggatatacgagagtat
tgccgtaacttaatagatattttatttaccgatactccacataatatacaagctattcta
accttaactaaagaaataactgaaaaacttttgcctactatttgggaaaaagaaggagga
gcagaactacttgagtttttaacaaaattaaccatatatagtaaatatgtaaattcaacg
gataaaaaggattttcctaaaattttttcttttttactttctaatatcaaatattacaaa
aataccgacgctgctagtattattataggacggcctgaagatttagcattatgtgaattt
gacttaattatattaccgcattttaataatgaaaactggacacttagtgctaaagctcac
ccatggcttagcaagaaagccttgcagatactaaatatagattacgatgaaatcgcccct
actctatattcagattacttcaatttatttctacaaaataagcaaatagttatactgaat
gctaaaaaatatgatgggaaactgtcagtgccgagtaatttatttttgaagctagaaaaa
ggttctgtgtcaccccgtgacttgatcacggggtccagtaattatatggataccgtggtc
aagccacggtatgacaagagtattgagatccacagcccctctttcccaaccaccttatca
gtaaccgaaatagaaacattaataagaaacccatacggtttttatgctaagaaaattctt
ggactacgtaaaaaagatcatatatgggaagagcctaaaatatcggatttcggtcatttg
attcataaagttttagaggaatattctaaaaattacgacaaacaatatattaatttaaat
ttgcttgacaaacaaaatgctttaataaatatcggtaatcatattttatatagcactatt
ttaccaagctacacaaaaaagacttggcaaataaaactcatggctttcagcaaagctttt
attttatttgatatagaacgccgaaaaaactgcaaagaaatctattttgaaactaaaggg
gagttacggctaaatattgtaggtcaagatataaaaataatcggtatagctgaccgaatt
gaaataagtaaatcaaacaatataactatactagattataagaccggtactattccgact
aagaaagaaatagaacttggactctctccgcaacttatcatagaaagtttgatgttacta
gaaaacggatttacgaaatgtaattctctgtcccttttatgtcatcctcagccccttttg
tgttattcctgcgaaagcgggaatccagttatgaataacaatattactatcgcctacgta
aaaataactagtaccgaaccttatgtgcacacaacggaaatagctttaagcatcgagact
ttaaatagacataaagcaggattagtaaaattacttgaacattatattacaaatcaattc
ttttcttatgatttgaatttatcaaagtataatgattatttgcatttgagtcgatag
DBGET
integrated database retrieval system
