Rickettsia japonica: RJP_0446
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Entry
RJP_0446 CDS
T01637
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rja
Rickettsia japonica
Pathway
rja00300
Lysine biosynthesis
rja00470
D-Amino acid metabolism
rja01100
Metabolic pathways
rja01110
Biosynthesis of secondary metabolites
rja01120
Microbial metabolism in diverse environments
rja01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
rja00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RJP_0446 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RJP_0446 (dapF)
Enzymes [BR:
rja01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
RJP_0446 (dapF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
Fer2
S_layer_C
Motif
Other DBs
NCBI-ProteinID:
BAK96660
UniProt:
G4KN02
LinkDB
All DBs
Position
572941..573753
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AA seq
270 aa
AA seq
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MISKINFVKMHGLGNDFVIVNKRDLSSSYDLSQLAKNMAERHTGIGCDQFIIYEEHNDFY
EMIIYNIDGSSAKLCGNATRCLAKLIYLDTGKQDITVMVGNKKLLCNVNDENNISVNVGS
VSFNEAWMPSRDKVWEFAERYMIDLKETICVDIGNPHVVIFSKLEPQDQKIVGEQLQAKE
LFADGVNVNFAEVKDNKIYLSVWERGVGLTLACGSGACGSFAAGLKRGFIHSPSTIVFKH
GNLTMKEENGNIIMQGAATLVARGEYYCEQ
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgattagtaaaattaattttgtaaaaatgcatggtctcggtaatgattttgttattgtt
aacaaacgagatttatcaagttcatatgatttatcgcagttagcaaaaaatatggctgag
cgtcatacaggtatcggttgcgatcagttcattatttatgaagagcataatgatttttat
gaaatgattatatataacatagacggctctagtgctaaattatgcggtaatgctacaaga
tgtttagccaagttaatttatcttgatacgggaaagcaagatattaccgtaatggtaggc
aataaaaaattgctatgtaatgtcaatgatgaaaataatattagcgttaatgtaggaagc
gttagttttaatgaagcttggatgccaagtcgtgataaagtttgggaatttgcagagcgt
tatatgattgatttaaaggaaactatttgcgttgatataggtaatccgcatgtagttatt
tttagtaagttagaacctcaagatcaaaaaattgtcggtgaacaattgcaggctaaggaa
ttattcgcagatggggtaaacgttaattttgctgaagtaaaagataataaaatctattta
tccgtttgggagcggggggtagggttaacgcttgcttgcggaagtggagcttgcggtagt
tttgctgccggtttaaagcgcggttttatccattcaccaagtactatagtctttaagcac
ggtaaccttactatgaaagaagaaaacggtaatataataatgcaaggtgcagctacgctt
gtagcacgtggggaatattattgtgagcaataa
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