Rickettsia japonica: RJP_0985
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Entry
RJP_0985 CDS
T01637
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunits gamma and tau chains
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
rja
Rickettsia japonica
Pathway
rja03030
DNA replication
rja03430
Mismatch repair
rja03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RJP_0985 (dnaX)
03430 Mismatch repair
RJP_0985 (dnaX)
03440 Homologous recombination
RJP_0985 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rja03032
]
RJP_0985 (dnaX)
03400 DNA repair and recombination proteins [BR:
rja03400
]
RJP_0985 (dnaX)
Enzymes [BR:
rja01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RJP_0985 (dnaX)
DNA replication proteins [BR:
rja03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RJP_0985 (dnaX)
DNA repair and recombination proteins [BR:
rja03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RJP_0985 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
AAA_22
AAA_14
RuvB_N
AAA_5
AAA_19
AAA_30
AAA_18
AAA_assoc_2
TIP49
AAA_16
Viral_helicase1
RNA_helicase
AAA_17
DUF3646
ResIII
Motif
Other DBs
NCBI-ProteinID:
BAK97175
UniProt:
G4KLT3
LinkDB
All DBs
Position
1253477..1255006
Genome browser
AA seq
509 aa
AA seq
DB search
MLDINSSNQYIPFARKYRPSNFAELQGQEVLVKVLSYTILNDRLAGGYLLTGIRGVGKTT
SARIIAKSVNCSALITENTTIKTCEECTNCISFNNHNHPDIIEIDAASKTSIDDIRRIIE
SAEYKPLQGKHKIFIIDEVHMLSKGAFNALLKTLEEPPPHIIFIFATTEVQKIPATIISR
CQRYDLRRLSFEEIFKLLEYITKQENLKTDIEALRIIAYKSEGSARDAVSILDQAASMSA
KSDNIISSQVINQMLGLVDSSVIIEFVECIIHRETEKAINLINKLYGSSVNLEIFIESVS
DFIAYLNKVKMLPNYSLPIYESFNDRTKNILDNTSLPHLSILWQIYNKGVGEIKISYNQL
TETEMLVIKSIYSTSLPLLTDFDGNNQNLNQSINPEIKKKFEIVDFLEYLYKNNEIDIYY
FLLNHTELKNLSNNRLEFVSLEVTSKIKRQIEDLLAAFTNEKFEIVIIKEQNKQTLKNQL
IGKIEASNDFGLIKKHFPNITISDILLKS
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
gtgctagatataaattcatcaaatcaatatattccttttgcaaggaaatatcgccctagt
aactttgccgagcttcaggggcaagaggtattagtcaaagttttaagctatactatttta
aacgataggctcgccggaggctatcttttaacaggtattagaggagtcggtaaaactact
tccgcccgaattattgctaaatccgtcaactgttctgctttaattaccgaaaatacgact
attaaaacatgcgaggaatgtacgaattgcatcagctttaataatcataatcaccctgat
ataatcgaaattgatgcggcaagtaaaactagcatagatgacatacgtagaattatagaa
tccgccgagtataagcccctacaaggtaagcataaaatcttcattattgatgaggtgcat
atgctctctaaaggggcatttaatgcacttcttaagacactggaagaaccaccacctcat
ataatatttatctttgcaacaacggaagtacaaaagatacctgcaactattatctcaaga
tgtcaacgttatgatttaaggcggttgagttttgaagagatttttaagctacttgaatat
ataactaagcaagaaaatttaaaaaccgatatagaagcactaagaattatagcttacaaa
tcggaagggtcggcacgtgatgcagtctctattttagatcaagcagctagtatgtcggcg
aaatctgacaatataattagttctcaagtaattaatcaaatgcttgggcttgtcgatagt
tcggttataatagaatttgtcgaatgtattatccacagagagacggaaaaagctataaat
ttaataaataaactttacggttcttcggttaatcttgagatttttatagaatcggtatca
gattttattgcttatcttaataaagtaaaaatgttacctaattatagtttgcctatatac
gaatcatttaatgatagaactaaaaacatattagataacaccagcttgccgcacttatca
atcttatggcaaatatataataagggagtaggggaaataaaaatttcctataaccaacta
acagaaacggaaatgttagttataaaatctatatattcgacatcgctacccttgcttaca
gattttgacggtaataatcaaaatttaaatcaatcaattaatccagaaataaaaaaaaaa
tttgaaattgtagattttcttgaatatttatataaaaataatgagatagatatatattat
ttcctgctcaatcatacggaacttaaaaatctcagtaataatagattagagttcgtaagt
cttgaagttacaagcaaaataaaaagacaaatagaagatttattagctgcttttactaat
gaaaagtttgagatagtaataataaaagagcagaacaagcaaaccttaaagaatcagtta
attggtaagattgaagcaagtaacgattttggtttaattaaaaaacatttcccaaatata
acaatttcagatattttacttaaaagctaa
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