Rhizobium jaguaris: CCGE525_00065
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Entry
CCGE525_00065 CDS
T05891
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
rjg
Rhizobium jaguaris
Brite
KEGG Orthology (KO) [BR:
rjg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rjg03032
]
CCGE525_00065 (gyrB)
03400 DNA repair and recombination proteins [BR:
rjg03400
]
CCGE525_00065 (gyrB)
Enzymes [BR:
rjg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CCGE525_00065 (gyrB)
DNA replication proteins [BR:
rjg03032
]
Prokaryotic type
DNA Topoisomerases
CCGE525_00065 (gyrB)
DNA repair and recombination proteins [BR:
rjg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CCGE525_00065 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
GyrB_insert
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AYG57404
UniProt:
A0A387FMD4
LinkDB
All DBs
Position
8457..10892
Genome browser
AA seq
811 aa
AA seq
DB search
MTDTSVTENGGNAEYGADSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVYEVVDNAIDE
ALAGHADIVTVTLNPDGSVTVTDNGRGIPTDIHTGEGVSAAEVIMTQLHAGGKFDQNSYK
VSGGLHGVGVSVVNALSVWLKLKIRRQGKIHEMSFTHGVADAPLRETGDAGSETGTEVSF
MPSSLTFTMTEFDYATLEHRLRELAFLNSGVRILLTDKRHSDIKQEEMIYDGGLEAFVAY
LDRAKKPLVEKPVSIHGEKDGITVEVAMWWNDSYHENVLCFTNNIPQRDGGTHMAGFRGA
LTRQITSYADTSGITKKEKVTLTGDDCREGLTAVLSVKVPDPKFSSQTKDKLVSSEVRPV
VESLVNEALSTWLEEHPADAKVLVGKVVEAAAAREAARKARELTRRKGALDIASLPGKLA
DCSERDPAKSEVFLVEGDSAGGSAKQGRSRENQAILPLRGKILNVERARFDKMLSSQEIG
TLITALGTGIGKDEFNADKLRYHKIIIMTDADVDGAHIRTLLLTFFFRQMPDLIERGHLY
IAQPPLYKVTRGKSVQYVKDEKALEEYLIGQGLEDASLRLGSGEVRAGQDLREVIVDALR
LRTLLDNLHSRYNRAVVEQAAIAGALNAELVSDPARAQGLVDDVAKRLDIIAEETERGWT
GSLTSEGGLRFERMVRGVKEVVVLDMALIGSQDARLIDQLGSRLKEIYDLPPKLVRRDDE
TEISGPRMLLETIFASGRKGLTMQRYKGLGEMNAEQLWETTLDPNVRSLLQVKVADATDA
DGLFARLMGDEVEPRREFIQDNALSVANLDI
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacacatccgtaaccgaaaacggcggcaacgccgaatatggcgcagattccatc
aaggttctgaagggccttgatgcagtgcgcaagcgtcccggcatgtacatcggtgacacg
gatgacggctcgggcctgcatcacatggtttatgaggtcgtcgacaacgccatcgacgag
gcgctggccggccatgccgatatcgtcacggtgacgctaaaccccgacggatcggtgacc
gtcaccgacaacggccgcggcatcccgacagatatccacaccggtgaaggcgtttctgca
gccgaagtcatcatgacccagctccacgccggcggtaagttcgatcagaactcctataag
gtctccggcggcctgcacggcgtcggcgtctctgtcgtcaacgcattatccgtctggctg
aaactgaagatccgtcgccagggtaagatccatgaaatgagcttcacccacggcgtcgcc
gatgcgccgctgagggagacgggagacgctggctccgagaccggcaccgaggttagcttc
atgccgagctcgctgaccttcaccatgacggaattcgactatgccacgctggagcatcgc
ctgcgcgagctcgcgttcctgaattccggcgtccgtattctccttaccgacaagcgtcac
tccgacatcaagcaggaagagatgatctacgacggtggcctcgaggctttcgtcgcctat
ctcgaccgcgccaagaagccgctggtcgagaagcccgtatcgatccatggcgaaaaggac
ggcatcaccgtcgaggtggcgatgtggtggaacgacagctaccacgagaacgtgctctgc
ttcaccaataacatcccacagcgcgatggcggtacgcatatggcgggcttccgtggcgca
ttgacgcgccagataacctcctatgccgatacgtcgggcatcaccaagaaggaaaaggtg
acgctgacgggtgacgattgccgcgaaggattgacggcagtgctttccgtaaaagttccg
gatccgaaattttcctcgcaaaccaaggacaagctggtatcgtcggaagttcgtccggtg
gtcgaaagccttgtcaacgaagcgctaagcacctggctcgaagagcatccggcagacgcg
aaagttctggtcggcaaggttgtcgaagccgccgccgcccgcgaagccgcccgcaaggcg
cgcgagctgacccggcgcaagggcgctctcgatatcgcgtcgctgcccggcaagctcgcc
gattgctccgaacgcgatccggccaagtctgaagtgttcctggtcgagggtgattcggcg
ggtggttcggccaaacagggccgttcgcgcgaaaaccaggcaatcctgccgctgcgcggc
aagatcctcaatgtcgagcgcgcccgtttcgacaagatgttgtcgagccaggaaatcggc
accttgatcaccgcgctgggcaccggcatcggcaaggacgagttcaatgccgacaagctg
cgctatcacaagatcatcatcatgacggacgccgacgtcgacggcgcccatattcgcacg
ttgctgctcactttcttcttccggcagatgcccgatctcattgagcgcggccatctctat
atcgctcagccgccgctctataaagtgacgcgcggcaagtcggtgcaatatgtcaaggac
gagaaggcgctggaagaatatctgatcggccagggcctcgaggatgcgagcctgcggctc
ggcagcggtgaagttcgtgccggccaggatctgcgtgaggtcattgtcgatgccctgcgt
ctgcgcacactgctcgacaatctgcattcgcgctataaccgcgccgttgtcgaacaggcg
gcaattgccggcgctctgaatgcggaactcgtcagcgacccggcgcgtgcgcaaggtctg
gtggatgacgtcgccaagcgactcgatatcatcgccgaggaaaccgagcgcggttggacc
ggcagcctcaccagcgaagggggattgcgtttcgagcgtatggtgcgtggcgtcaaggaa
gtcgtcgttctcgacatggcgctgatcggctcgcaggacgcgcgtcttatcgatcagctc
gggtcgcgcctcaaggagatctatgacctgccgccgaagctcgtgcgccgtgacgatgag
accgagatttctggtccgcgcatgttgctggaaaccatcttcgccagcggccgcaagggt
ctcaccatgcagcgctataagggcctcggcgaaatgaacgccgagcagctttgggaaacg
acgctcgatccgaacgtccgttcgctgctgcaggtcaaggtcgccgatgcgaccgatgcc
gacggtttgtttgcccggctcatgggcgatgaagtcgagcctcggcgcgaattcattcag
gacaacgccctgagcgtcgccaacctcgatatctga
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