Rhizobium jaguaris: CCGE525_00420
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Entry
CCGE525_00420 CDS
T05891
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K23237
AraC family transcriptional regulator, melibiose operon regulatory protein
Organism
rjg
Rhizobium jaguaris
Brite
KEGG Orthology (KO) [BR:
rjg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rjg03000
]
CCGE525_00420
Transcription factors [BR:
rjg03000
]
Prokaryotic type
Helix-turn-helix
AraC family
CCGE525_00420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
Cupin_2
AraC_binding
Cupin_6
AraC_binding_2
Motif
Other DBs
NCBI-ProteinID:
AYG57462
UniProt:
A0A387FQF8
LinkDB
All DBs
Position
89712..90656
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AA seq
314 aa
AA seq
DB search
MDLAESKVGHRAVYQPGASSIEGLPTTLQMFHSHPPPMVKPHWHAQVEVNYLIRGTVHYR
MNDHEIQLNAGDICLFWGGQPHQMDDSSEDSIYAGAHLPLVHFFRMRLPLDISGRLMRGE
TLVTSATDAADHENFARWYRYARSGDPAKAEHAVAELLLRLERIAFEPYRMLPEKREHQP
SEQVHPQSSRSVARMCDFIAGNFLHDIDTVDIARAADLHPKYAMNLFKKSTGMTLSKYVN
LLRLSRAQAMLMREGANVLQVAMDSGFGSISAFNKSFRHIAGMSPSDFRRDMRMVTAMSV
EGAQPSLRRSAPQF
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atcgacttggcggaaagtaaggtaggtcatcgtgcggtttatcagccgggtgcgagcagc
atcgaggggctgccgacgaccctgcagatgtttcattcccatccgcccccgatggtgaag
ccgcattggcacgcccaggtagaagtgaattaccttatacgcggcacggttcactaccgt
atgaacgaccatgaaattcagctcaacgccggcgatatctgcctgttctggggtggacag
ccgcaccagatggatgattcgtcggaggattcgatttatgccggcgcgcatctgccgctg
gtgcacttcttccgcatgcgtctgccgctcgatatttccggccgcctgatgcggggcgag
actctggtgacttccgcgacggatgccgccgatcacgaaaatttcgcccgctggtatcgc
tacgcccgttccggcgatccggccaaggccgaacacgcggtcgccgaacttctgctgcgc
ctggagcgcatcgccttcgagccctatcgcatgctgccggaaaagcgggagcaccagccg
agcgaacaggtccatccgcaatcgtcgcgcagcgtggcgcggatgtgcgatttcatcgcc
ggcaatttcctgcacgatatcgatacggtcgatattgccagggcggcggacctgcatccg
aaatatgcgatgaacctcttcaagaaatccaccggcatgacgctcagcaaatatgtcaac
ctgctgcgcttgtcgcgcgcccaagcgatgctgatgcgcgagggcgccaatgtgttgcag
gtggccatggacagcggcttcggctcgatcagcgccttcaacaaatccttccgtcacatc
gccggcatgtcgccttcggattttcgtcgggacatgcggatggtgacggcaatgagcgtc
gaaggcgcccagccgtcgcttcgccggtcagccccgcaattctag
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