Rhizobium jaguaris: CCGE525_00460
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Entry
CCGE525_00460 CDS
T05891
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
rjg
Rhizobium jaguaris
Brite
KEGG Orthology (KO) [BR:
rjg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rjg03016
]
CCGE525_00460
Enzymes [BR:
rjg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CCGE525_00460
Transfer RNA biogenesis [BR:
rjg03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CCGE525_00460
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AYG57469
UniProt:
A0A387FG32
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All DBs
Position
97620..98246
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AA seq
208 aa
AA seq
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MAATIRYHEGDISAADAARYTGAIAIDTETLGLIPRRDRLCVVQLSPGDGTADVIRIASG
QKEAPNLVAMLADPTRQKIFHYGRFDIAVLFHTFGVTTTPVFCTKIASRLCRTYTDRHGL
KDNLKEMLEVDISKAQQSSDWAAETLSPAQLEYAASDVLYLHALRDKLTERLVRDGRIEH
ANACFTFLPTRAKLDLLGWEETDIFAHS
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggccgccaccatccgttatcacgaaggcgatatttccgccgccgatgctgcccgctac
accggcgccatagcgatcgataccgaaacgctcggcctcatcccgcgccgtgaccggctc
tgcgtggtgcagctttcgccgggcgatggcaccgctgatgtgatccgcatcgcgtccggc
cagaaagaggcgccgaatcttgtcgctatgctcgccgatcccacgcgccagaagatcttt
cattacggccgctttgatatcgccgtgctgttccacacgttcggtgtcaccaccacgccg
gttttctgcaccaaaatcgcctcgcgcctctgccgcacctatacggaccggcatggcctc
aaggacaatctgaaggagatgctcgaggtcgatatttcaaaggcgcagcagtcttccgat
tgggcggctgagacgctctcgccggcgcagctcgaatatgccgcctcggacgtgctttat
ctgcatgcgctccgcgacaagttgacggagcgtcttgtgcgcgacggccgcatcgaacat
gccaatgcctgcttcaccttcctgccgacgcgggcgaagctcgacctccttggctgggaa
gagaccgatattttcgcgcatagctga
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