Rhizobium jaguaris: CCGE525_05485
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Entry
CCGE525_05485 CDS
T05891
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
rjg
Rhizobium jaguaris
Brite
KEGG Orthology (KO) [BR:
rjg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rjg03000
]
CCGE525_05485
Transcription factors [BR:
rjg03000
]
Prokaryotic type
Helix-turn-helix
Other families
CCGE525_05485
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
AAA_lid_14
AAA_5
Mg_chelatase
AAA
AAA_2
HTH_8
HTH_7
HTH_30
HTH_29
HTH_28
HTH_23
HTH_17
HTH_22
Motif
Other DBs
NCBI-ProteinID:
AYG58327
UniProt:
A0A387FLJ6
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All DBs
Position
1138375..1140270
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AA seq
631 aa
AA seq
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MQHLSGIDRARYALEKGQRIPVGALQPVVAASWQRCRDNGLDPHKPPPQQVISFSDIKRR
REAKSAMRHLALAEMQLLYSQIAGSNFMIALADADGVVMDTISDQHFADSEAGRAILPGS
VWSEGERGTNALGLAAAIGTSVAIYGREHYFAGHGHLSCMAAPILNPHGEICGLLDASCT
HEARQEHTHALVRMAAAQIEKGLVYRECSDSFVFAFHPRVEYLDTLSAGLLSVSPDGCVT
SINSRGKVLLAGLPAMLGSHFDTLFEAGFGAAMDGLLNGGCIRIRDRAGSGVFMICRQIG
QGRLAARKPVASAVPPLLQKQDMPDFVCDDHSVKRSLGDVSSAAKLRMPMHITGETGTGK
ELMARHIHRVSGRKGEFVAVNCGAVPEDLFIAEIFGHERGAFTNARTEGAPGLVRSADRG
TLFLDEVAEIPLAAQTSLLRFLDSMEVRAVGGQKVDKVDVQIVSATNRDLERMVTERLFR
ADLYYRLNAFTVHLPPLRARSDFAAIVRYLMEKMAPGMPVTDAAIANLSMRHWQGNIREL
KTVLQRALVRRRTDYIDEDCFDEAVPALNSSEDCCEECRRRPLSRAKCQEIRSVYRRTNE
NVSQTARALGLSRTTVYKHVGSPQGYRTLVE
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgcaacatctgtcgggtatcgatcgcgcgcgttatgcgcttgagaagggccagaggatt
cctgtgggcgccctgcagccggtcgttgccgcgagctggcaacgctgccgcgacaacggc
ctcgatccccacaagccgccgccgcaacaagtcatttcgttttccgatatcaagcgtagg
cgggaggcgaagtcggctatgcgccatctggccctggcggaaatgcagcttctctattca
caaatcgccggctccaacttcatgattgcgctcgctgacgctgacggtgtcgtgatggat
acgatcagcgaccagcatttcgccgacagcgaggctgggcgcgccatcctgccgggcagc
gtctggagcgaaggcgaacgcggcaccaatgcgctcggtcttgccgcggcaattggaaca
tccgtggcgatctatggccgggaacattattttgccggtcatggtcatctgagttgcatg
gctgctccgatcctcaatccgcatggcgagatatgtggtttgctcgatgcctcgtgcacg
catgaggcacggcaggaacatacgcatgcgctcgtgcgcatggcggcagcgcagatagaa
aaggggctggtttatcgggaatgctccgacagcttcgtctttgccttccatccgcgcgtg
gaatatctcgatactttgtccgctggcctcctatccgtctcgccggacggttgcgtcacg
tcgatcaacagtcgtggcaaggtgctgctggcgggtctacccgctatgctcggcagtcac
ttcgacacgctgttcgaagcggggttcggggcggcaatggacggccttctcaatggcggc
tgcattcgcatccgcgatcgtgccgggagtggcgtcttcatgatctgccggcagatcggg
cagggtcggctcgccgcgcgcaagcctgtggcgtcggctgttcccccgttgctgcaaaag
caggacatgccggatttcgtctgcgacgaccatagcgtaaagcggtcgctcggcgatgtc
tccagcgcggcgaagctgcgcatgcccatgcatattaccggcgaaacgggcaccggaaag
gaattgatggcgcggcacatccatcgcgtcagcggccgcaagggcgagttcgttgccgtg
aattgtggcgctgtgcctgaggatctctttatcgccgagatattcggacatgaacgcggc
gccttcaccaatgcgcggacggagggtgcaccgggtcttgtccgcagtgccgatcgggga
acattgttcctcgatgaggtggcggaaatccctcttgccgcccagacctcgctgctgcgt
ttcctcgacagcatggaagtgcgcgcggtcggtggccaaaaagtcgataaggtagacgtg
cagatcgtctccgccaccaaccgcgaccttgagcgaatggtcaccgagcggctgttccgc
gccgacctgtactaccggctcaacgccttcaccgtgcatctgcctccgctcagagcacgc
agcgattttgcagcgattgtgcgctatctgatggagaaaatggcgcccggcatgcctgtg
accgatgcagcgatcgccaatctctcgatgaggcactggcagggcaatatccgcgaacta
aagacggtgttgcagcgagcgctggtacggcgacgtaccgattatatcgatgaggattgc
tttgacgaagccgtgcctgccttaaattcgtctgaggactgctgcgaggaatgccggcgc
cgcccgctcagccgtgcgaaatgccaggagatacgctcggtctatcgcaggaccaatgag
aacgtctcgcagaccgcccgcgccctcggcctttcccggacgacggtgtacaaacatgtc
ggctcaccgcagggatatcggacgctcgtggaatag
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