Rhizobium jaguaris: CCGE525_12660
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Entry
CCGE525_12660 CDS
T05891
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rjg
Rhizobium jaguaris
Pathway
rjg03420
Nucleotide excision repair
rjg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rjg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CCGE525_12660
03430 Mismatch repair
CCGE525_12660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rjg03400
]
CCGE525_12660
Enzymes [BR:
rjg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CCGE525_12660
DNA repair and recombination proteins [BR:
rjg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CCGE525_12660
MMR (mismatch excision repair)
Other MMR factors
CCGE525_12660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AYG59551
UniProt:
A0A387FUQ2
LinkDB
All DBs
Position
2590719..2593196
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AA seq
825 aa
AA seq
DB search
MTIGHDDIPFFDEEPEHLAPHPATRRPAPAPGPAGGGIAARAMAARDSGRRPDYLAGLNP
EQAEAVETLDGPVLVLAGAGTGKTRVLTTRIAHILSTNRAFPSQILAVTFTNKAAREMKE
RVALLVGGAVEGMPWLGTFHSIGVKLLRRHSELVGLSSSFTILDTDDVVRLIKQLIQAEG
LDDKRWPAKQFAGMIDTWKNKGLGPADIPEGDARAFANGKGRELYTAYQARLKTLNACDF
GDLLLHPINMFRQNPDVLKEYHQRFRYILVDEYQDTNTAQYMWLRLLAQRPKGELQNVCC
VGDDDQSIYGWRGAEVDNILRFEKDFPGAKVIKLERNYRSTEHILGAAAHLIAHNEGRLG
KTLFTDRADPDDIKVQVHASWDSEEEARAIGEEIEQLQRSKHNLNDMAILVRASFQMREF
EDRFVTLGLNYRVVGGPRFYERLEIRDAMAYFRLVCQPADDLAFERIINTPKRGLGDTTV
RALHDYARVRDIPMLAAAADIIETDEMKPKARKALFDVVQSFRRWQGLLENTPHTELAEQ
ILEESGYTDMWKNDKSAEAPGRLENLKELIRSMDSFESMRGFLEHVALVMDAEQNEDLDA
VSIMTLHSAKGLEFDTVFLPGWEEGLFPHQRSLDESGRAGLEEERRLAYVGLTRAKRRCH
IWFVSNRRIHGLWQSTIPSRFLDELPETHVEVAEMEQSYGGYGRGGYGQSRFDKADPFAN
SYSTPGWKRAQANKTDATRDNWGSRSGHAVERIGYGESGPKTRTIDGELVAKSTSSEPSR
FSVGDRVFHIKFGNGNVSEIEGNKLTIEFDRAGQKRVLDGFVERA
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcggacatgacgacattcccttctttgacgaggagccggagcaccttgctccg
catccggcaacgcgccggcctgcgcccgcaccgggccccgccggcggcggtattgcggcc
cgcgcgatggcagcgcgcgatagcggccgccggcccgactatctcgccggcctcaatccg
gaacaggcagaagcggtcgagacgctggatggaccagttctcgtgctcgccggcgccggc
accggcaagacacgtgtgctgacgacccgcatcgcccatatcctgtccaccaaccgcgct
ttcccctcgcagatcctcgctgttaccttcaccaacaaggccgcgcgcgagatgaaggag
cgcgttgcgctgctcgtcggcggcgctgtcgagggtatgccctggctcggcactttccac
tcgatcggcgtcaagctgctgcgccgtcactccgagttggtcggcctctcctcgagtttc
accattctcgacaccgatgatgttgtgcgtctgatcaagcagttgatccaggccgaaggc
ctggacgacaagcgctggccggccaagcaattcgccgggatgatcgacacctggaagaac
aagggcctcggcccggcggatattcccgagggcgatgcccgcgccttcgccaacggcaag
ggccgcgaactctataccgcctatcaggcccgcctgaagacgctgaacgcctgcgacttc
ggcgaccttttgctgcatccgatcaatatgttccgacaaaacccggatgtattgaaggaa
taccatcagcgtttccgctatatcctcgtcgacgagtatcaggacacaaacaccgcgcaa
tatatgtggctgcgtctgctggcgcagcggccgaagggcgaactgcagaatgtctgctgc
gtcggcgacgacgaccagtcgatctatggctggcgcggcgccgaagtggacaacatcctg
cgcttcgaaaaggattttcccggcgccaaggtgatcaagctggagcgcaactaccgctcc
accgagcatattctcggtgcagcagcacacctcatcgcgcataatgagggccggctcggc
aagacgctgttcaccgaccgcgccgatccggacgacatcaaggtgcaagtgcacgcctcc
tgggattccgaggaggaagcgcgtgcgatcggcgaggagatcgaacagcttcagcgaagc
aagcacaatctcaatgacatggcgatcctagtgcgcgcctccttccagatgcgcgaattc
gaagatcgtttcgtcacgctcggcctcaattatcgcgtcgtcggcggcccgcgcttctac
gagcgcctcgaaatccgcgatgccatggcctatttccgcctcgtctgccagccggccgac
gatcttgccttcgagcgcatcatcaacacgccgaagcgtggcctcggcgataccaccgtg
cgcgccctgcatgactatgcccgcgtccgcgatatcccgatgctggcggcggccgccgat
atcatcgagacggacgagatgaagccgaaggcgcgtaaggcgctgttcgacgtcgtacaa
tccttccgccgctggcagggtctgctcgaaaacaccccgcatacagagcttgccgaacag
attcttgaagagtccggctataccgacatgtggaagaacgacaaatcggcggaagcgccg
ggtcgcctggaaaacctcaaggaactcatccgctccatggatagtttcgaatccatgcgc
ggcttcctcgaacacgtcgccctcgtcatggacgccgagcagaacgaggatctggacgct
gtctcgatcatgacgctgcactctgccaagggcttggaattcgacacagtcttcctgccc
ggttgggaggaaggtcttttcccgcaccagcgctctctcgatgaatccggccgcgccggc
ttagaggaagaacgccgcctcgcctatgtcggcctcacccgcgccaagcgccgctgccac
atctggttcgtctccaaccgccgcatccacggcctctggcaatcgaccattccttcacgc
ttcctcgacgaactgccggagacccatgtcgaagttgcggaaatggagcagtcctatggc
ggttacggtcgcggcggctatggccagtcgcgcttcgacaaggccgatcccttcgccaac
tcctattccacccccggctggaaacgcgcccaggccaacaagaccgacgccacccgcgac
aactggggctctcgctccggccacgcggtcgaacgcatcggctacggcgaaagcggcccc
aaaacccgcaccatcgacggcgagctggtcgccaaatccacctcctccgaaccctcccgc
ttctcagtcggcgaccgtgtcttccacatcaagttcggcaacggcaatgtttcggagatc
gaaggcaataaactgacgatcgaattcgatcgggccgggcaaaagcgtgtgctggatggg
tttgtggagcgggcgtga
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