Rhizobium jaguaris: CCGE525_13580
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Entry
CCGE525_13580 CDS
T05891
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rjg
Rhizobium jaguaris
Pathway
rjg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rjg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CCGE525_13580 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rjg03019
]
CCGE525_13580 (recQ)
03400 DNA repair and recombination proteins [BR:
rjg03400
]
CCGE525_13580 (recQ)
Enzymes [BR:
rjg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CCGE525_13580 (recQ)
Messenger RNA biogenesis [BR:
rjg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CCGE525_13580 (recQ)
DNA repair and recombination proteins [BR:
rjg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CCGE525_13580 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
AAA_30
GARS_N
Motif
Other DBs
NCBI-ProteinID:
AYG59718
UniProt:
A0A387FLG3
LinkDB
All DBs
Position
complement(2780120..2782000)
Genome browser
AA seq
626 aa
AA seq
DB search
MSQPDRQEPRFSADDPLFGRDNSGAAPLDILKRVYGYSAFRGKQQQVVEHVVSGGDAVVL
FPTGAGKSLCFQIPALCRDGVGIVVSPLIALMRDQVEAMKQLGIRAAALNSSLSREEASD
VYRSISSGTLDLLYVTPERILTDGFQQMIARAKIALFAIDEAHCVSQWGHDFRPEYRDLG
RLADLFPDVPRIALTATADPHTRDDIIERLALDNAKVFTTSFDRPNITYEIVERDQPRQQ
LLRFLDGHRGDSGIVYCLSRAKVEDTAEWLNGQGIRALAYHAGMDRSLRDANQDAFLKEE
DLCLVATVAFGMGIDKPNVRYVAHLDLPGSVEAYYQETGRAGRDGLPSEVWMAYGMADVI
QRRRMIDEGNAAEEIKRVERAKLNALLAICETAGCRRQAILAHFGEGHGGGCGNCDTCLK
PVETWDGTEAAIKALAAVYRTGERFGTGHVIDVLIGTVNEKTERFGHVDMPVFGAGKEIP
ARTWQSVFRQLLASGFVSIDHTAFGAMKLEPEARAVFKRERQVFFRKDRSETGRRTKKAA
RIEKRASALSGEAQPLFEALRAERTKIAKALGVPPYVVFPDTTLIAFATEQPATRDALLG
ISGVGQSKLERYGDAFLKVIEDFTNR
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagccagatcgacaggagccgcggttttccgccgatgatccgctgttcgggaga
gacaactcgggagccgcgccgctcgatattctcaagcgggtctatggctattccgccttc
cgcggcaagcagcagcaagtggtcgagcatgtggtttccggcggggatgcggtggtgctg
tttccgaccggcgccggcaaatcgctatgtttccagattccggcattatgccgcgacggc
gtcggcatcgtcgtttcgccattgattgctctgatgcgcgatcaggtcgaggcgatgaaa
cagctcggcatccgcgcggcggcgctgaattcgtcgttgtcgcgtgaggaagcaagcgat
gtctatcgctccatatccagcggcacgctcgatctgctctacgtcacgcccgagcgtatt
ctgacggacggctttcaacagatgatcgccagggcgaaaattgccctgttcgcgatcgac
gaggcgcattgcgtctcgcaatggggacatgatttccggccggaataccgtgatctcggc
aggctcgcggacctctttcccgacgtgccgcgcatcgccttgacggcgactgccgatccg
cacacgcgcgacgatatcatcgagcggctggcgctcgacaacgccaaggttttcaccacc
agcttcgaccggccgaacatcacctatgagatcgtggagcgcgatcagccgcgccagcaa
ttgctgcgtttccttgatggtcatcgtggtgatagcggcatcgtctattgcctgtcgcgg
gccaaggtcgaggataccgcggagtggctgaacgggcagggcattcgtgcgcttgcctat
cacgccggcatggatcggtcgctccgcgatgccaatcaggatgccttcctgaaggaagag
gatctttgccttgtggcgacggtcgcattcggcatgggcatcgacaagcccaatgtgcgc
tatgtcgcccatctcgatctgcccggttccgtcgaggcctattaccaggagacgggacgc
gccggacgcgatggcttgccgtccgaagtctggatggcctatggcatggccgatgtcatc
cagcggcgacgcatgatcgacgagggcaatgcggcggaagagatcaagcgcgtagagcgc
gccaagctcaacgcgctgctcgccatctgcgagacggccggctgccgccgacaggccatc
cttgcgcatttcggcgaggggcatggcggggggtgcggcaattgcgatacctgcctgaag
ccggtcgagacgtgggatggcacggaagcggcaatcaaggcactcgccgccgtctatcgc
acgggggagcgtttcggcaccggccatgtcatcgacgtgctgatagggacagtcaatgag
aagaccgagcgtttcggtcatgtggacatgccggtcttcggggccggcaaggaaattccg
gcgcgcacctggcagtccgtcttccgtcaactgttggcgagcggcttcgtcagcatcgat
cacacggctttcggcgcgatgaagctggagccggaggcacgggcggtcttcaaacgcgag
cgtcaggtcttctttcgcaaggataggtcggagacgggccggcgcaccaagaaggctgcg
cggatcgagaagcgcgcatccgccctttccggcgaggctcaacctctattcgaggcgttg
agagcggagcggaccaagatcgccaaagcgctcggcgtgccgccctatgtcgtctttccg
gatacgacgttgattgctttcgctacggagcagccggcaacccgcgatgctctcctggga
atttcgggcgtggggcagtcgaagttggaacggtatggggacgcgttcttgaaggtgata
gaagatttcaccaatcggtaa
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