Rhizobium jaguaris: CCGE525_25335
Help
Entry
CCGE525_25335 CDS
T05891
Name
(GenBank) L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
rjg
Rhizobium jaguaris
Brite
KEGG Orthology (KO) [BR:
rjg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rjg01002
]
CCGE525_25335
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rjg01011
]
CCGE525_25335
Peptidases and inhibitors [BR:
rjg01002
]
Cysteine peptidases
Family C82
CCGE525_25335
Peptidoglycan biosynthesis and degradation proteins [BR:
rjg01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
CCGE525_25335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
LXG
Motif
Other DBs
NCBI-ProteinID:
AYG62165
UniProt:
A0A387FY81
LinkDB
All DBs
Position
pRCCGE525c:686896..688389
Genome browser
AA seq
497 aa
AA seq
DB search
MAQRLARTVIPLIGALAATLHAAHAAPPAARLAPQVKHTSDYRTPVMRQVHIVPTISGPG
LLTLFGADGLQAQTLREMGNASIFATDDIARAIEGFYGQPKAKTIWVDAGGPTSKAIQAL
SFLKQADDWGLNAGDYTVKQTYDRYPKGSTERTQALAQFEASLSTKFLMFLQDNYRGRID
PNALSNYYDFKRKSLDLAATLSELGLAPNLSLVIKHVVPDNAKFAQLAIELQFLRSSSAS
SNTLADINKVVVAMEELRWLPREFPDRYVFINQPAYMAYYQENGQLALSMKAVIGQQDHQ
TNFFDATIKTVEFNPDWGVPQSIIKNEMLPKLRRDPNYLDREGYKVSVKGKMMPSAKVDW
SQPLDNISVVQPPGPENALGRLKILFPNPHAIYMHDTPARGKFASQDRMFSHGCIRLQNP
QAMAAAVLKTSIDFVDGQIADGATKDMPVPEEVPVYVAYFTAWPTTDGTVHYYEDIYGRD
AETLNAIAAITASRSNT
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcgattggcccgcacggtcattccgctcatcggagccttggcggcaactctc
catgccgcacatgctgcgcctccggcggcgcgcctagctccgcaggtgaagcacaccagc
gattaccgcactcctgttatgcggcaggtccacattgtaccgaccatcagcggaccaggc
ttgttgactctcttcggagccgatggattgcaggcgcaaacactacgggagatgggaaac
gcgtcgatcttcgccacggatgacatcgcgcgagcaattgagggcttctacggacagcca
aaggctaaaacaatttgggttgatgcaggcgggccaacgtcgaaggcaatccaggcactg
agctttctcaaacaagcggatgactggggcctcaatgctggcgactacacagttaagcag
acctacgaccgatatcccaagggttcgactgagagaactcaggcgcttgcacagttcgag
gccagtctgagcaccaagttcctcatgttcctgcaagacaattatcgtggacgtatcgat
ccgaacgcgctctcgaactattacgatttcaagcgcaaaagtctggatctagcggccacc
ctgagtgagcttggcttagctccaaacctgtcgctcgtaatcaagcatgtggtgccagac
aacgccaaatttgcgcagctcgcgatcgaactccaatttcttcgcagctcgtccgcttcg
agcaatacattggccgatatcaacaaggttgtcgtcgcgatggaagaactgcggtggctt
ccgcgggagtttccggatcgatacgtcttcatcaatcagcctgcgtacatggcctattat
caggaaaacgggcaactggctctttcgatgaaggcggtgattgggcagcaggatcatcaa
acaaactttttcgatgcaaccatcaaaacggtcgagttcaaccctgattggggcgttccg
caatcgatcatcaagaacgaaatgctacccaaactgcggcgcgatcccaactaccttgac
cgggaaggctataaggtttccgttaaaggcaaaatgatgccgtcggcaaaagtcgactgg
tcgcaacccctggacaacatctcggtggtgcagccaccggggccggagaacgcgcttggt
cgtttgaagattctgtttcctaatccgcatgccatctacatgcacgacaccccggctagg
ggaaaatttgcgtcacaggatcgtatgtttagccacggatgcatccgccttcaaaaccct
caggcgatggcggcagccgtgttgaaaacctcgattgatttcgttgatggtcagatcgca
gacggagcaacaaaggacatgcccgtccccgaggaggtgccggtatatgtcgcttacttc
accgcctggccgacaactgacggaaccgtgcactactacgaagatatttacggtcgtgat
gccgaaacgctaaacgcaattgcggcgatcaccgcgagccgttcgaacacctaa
DBGET
integrated database retrieval system
