Rhizobium jaguaris: CCGE525_35170
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Entry
CCGE525_35170 CDS
T05891
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
rjg
Rhizobium jaguaris
Pathway
rjg02020
Two-component system
rjg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rjg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CCGE525_35170 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CCGE525_35170 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rjg03021
]
CCGE525_35170 (rpoN)
Transcription machinery [BR:
rjg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CCGE525_35170 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
AYG64058
UniProt:
A0A387G0I0
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All DBs
Position
pRCCGE525b:complement(225404..226843)
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AA seq
479 aa
AA seq
DB search
MQYLANLLQRQRQSLVITPQLIQSIRLLQLAHGELRQFVEQELEKNPFLELASSDGMASD
DVVSTSESGPDIGAHDSKVDAPTRADAPEPLGEWKSIRNTANASSEQRPAFEEFAASTET
LHDDVARQIALTAFTSRDRLIAGALANHLEDTGYLQVNLSELAASLDAREDELERVLATL
QLFDPPGIFARTLSECLEIQLRQRDRFDPAMEALVANLELVAQRDFRALKRRCGVDEEDL
LDMLHEIRTLDPRPGNRFQSGRPEAIIPDVRVMPSTGGGWQIELNPDMLPKVLINQTYFA
EVSRLTAHDPQDQAFLNECFQNANWLVRSLDQRAKTILKVATEIVRQQDVFLEHGIAHLR
PLNLKTVADAIEMHESTVSRVTSNKYILTPRGVFELKYFFTVAIASSEGGEAHSAEAIRH
RIKAMIAAETEDNVLSDDSMVAQLRASGIDIARRTVAKYREVMNIPSSVQRRREMRAGL
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgcagtatttagcaaaccttctccagcgccaaaggcaatcgctggttatcacgccccag
ctcatccaatccattcgcttgctgcaactggcgcacggcgaactgcgtcagttcgtcgag
caggaattagagaaaaacccctttctggagctggcatcaagcgacggcatggcttctgac
gatgtcgtgtcgacctcggaaagcggcccggacatcggcgcacacgacagcaaggttgat
gcgccgacacgtgccgacgcccccgagccgctcggggaatggaaatcaattcgaaatact
gccaatgcttcgtcagagcagcgcccggccttcgaggagtttgctgcctcgaccgaaaca
ttgcacgacgatgtcgctcggcagatcgccttgactgcatttacctcaagagatcggctg
attgccggcgcgctcgccaatcatctggaagacaccggatatcttcaggtgaacctttcg
gagctggcggcgagtctcgatgcccgcgaagatgagctcgaacgggttctcgcaaccttg
cagcttttcgatccacctggaatttttgcacgaactcttagcgaatgcctcgagatacag
ttgcgccagcgagatcggttcgaccccgctatggaagcgctggttgccaatcttgagctg
gtcgcgcaacgcgactttcgcgcattgaaacggcgctgcggcgtcgacgaagaagacctt
ctcgacatgttgcatgaaatccgaacactggatcccaggcctggaaatcgcttccagtcc
ggaagaccggaagccatcatccccgacgttcgggtcatgccttccaccggaggcgggtgg
caaatcgagctcaatcccgacatgctgcccaaagtgctcatcaatcaaacctattttgcc
gaagtctctcgtctgaccgcgcatgatccgcaagatcaggcattcctcaatgaatgcttc
caaaacgcgaactggttggttcgcagtctcgatcagcgcgccaagacgatccttaaggta
gcgaccgaaatcgtccgtcagcaggatgtctttctggaacacggcatcgcccatcttcgg
ccgctcaatctcaagactgtcgctgacgcgatcgagatgcatgagtcgaccgtaagccga
gtgacttcgaataaatacattctcacgccaaggggcgtgttcgaactgaagtattttttc
acggtcgcgattgcctcctccgaaggcggcgaggcacactcagccgaagctatccgccat
cgcatcaaggcgatgatcgccgcggaaacggaagacaatgtgctttccgatgacagcatg
gtcgcccaacttagggcaagcggaatcgatattgcgcgacgtaccgtcgcaaaatatcgc
gaagtaatgaacatcccctcctccgtgcaacgtcgccgcgagatgcgtgcaggcttgtaa
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