Rhinichthys klamathensis goyatoka (western speckled dace): 130068905
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Entry
130068905 CDS
T09701
Symbol
limch1b
Name
(RefSeq) LIM and calponin homology domains-containing protein 1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rkg04990
]
130068905 (limch1b)
Domain-containing proteins not elsewhere classified [BR:
rkg04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
130068905 (limch1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4757
LIM
CAF1A_acidic
Motif
Other DBs
NCBI-GeneID:
130068905
NCBI-ProteinID:
XP_056088515
LinkDB
All DBs
Position
Unknown
AA seq
974 aa
AA seq
DB search
MRRELDSPQRSVRDSGYIDCCESERSHSLSPPRHTRDDSFDSLDSIGSHSRHTPSPDGLL
GLGYSDGRGSDSESDAPQRKMPDVRKDDMLVRRTSVSEPRIALPFNQYLPNKANQGTFMP
APVRRPRADRDDSCRSWSSTTSPVGGERPFSVSETLWLDVSCVVTGSDVLCVESQIESEN
SRASPQNDPVSMNPQLSDPQIRSPLHPSVHPLDHEQSHSEERDRRDAFCQTPPNPPDPLQ
NDSLTSINQTAGNDIRFSRSSSVFDDPESVSMIDMRGSEEDSMLPPHSQVRHELMHNQYN
MLKEEEDHWQDDLAKWKSRRRSVSQDLIKKEEERKMMERLLSGGGGSQRRKSIKTYREIV
EEKERREQELHEAYRSARTPEEAASVLQRYALRFTISEAVLERLKLPKLLERSVSADPTR
HSSFPVSSDISCSFSACSNPLQYLRQQSLPAAKFISSVEAQVTGYSTEPGNVRDMECVSG
PSRSHATAPSLAPRPYRQSRSSTAKVQTAQESTFLIANEMVRVNGEREDDEQKGGRNRER
EEDCLQFLSSPFQHTDSDLTDPDVSAGSTHTPERWEIHREHTQTEGAAVPQVTDNPTEVL
EMKPDDTATDEEQTDETCVSDSLQTVIQADSSAQVNELVTEIPQNLSEASAAESCRTRPD
LTEKAGNVLNLVKRGEHFSWSPEEERKRQESWQREQERMLQEKYRREQEKLKQEWEQAQK
EVEEEERRYHEEERKILEETVTPLTPLSPLTPVTPHSPTALSVLPKTQNTLHSQPEREHR
LGPVENQTSSETCRQGENGIGEAAQTHTQSLQMTVSSSPQPGCVSVGPRGRGRGEPLQSP
QDTPLGNREQNETWNKNTSQPKPGGRKRSDSIENIGPNPSSSPSFTDTQTPPSPNRSVSG
KKLCSSCGHPLGKGAAMIIETLSLYFHIQCFKCGICKGQLGDTSTGTDVRIRNGLLNCHQ
CYIRSRSAGQPTTL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgagaagggagctggacagcccgcagcgcagcgtcagggacagtgggtacatcgactgc
tgtgagtcggagcgcagccactctctctccccgccgagacacacacgagacgactcgttc
gacagcctggactccatcggctcgcactcccgccacactccctcgcccgacggcctgctc
ggcctcggctacagcgatggccgcggcagcgactcggagagcgacgccccccagaggaag
atgccggacgtgcgcaaggacgacatgctggtgcggagaacgtccgtcagcgagccacgg
atcgcccttcctttcaaccagtacctgcccaacaaggctaaccagggcacgttcatgccc
gcgccggtgcgccgcccgcgcgcagaccgagacgacagctgcagaagctggagcagcaca
acctcacctgtcggaggggagaggcctttcagtgttagtgaaaccctttggttagacgtg
tcctgtgtggtaacaggaagtgatgttctctgtgtagagtctcagatagagagtgagaac
tccagagcttctcctcagaacgaccctgtgtccatgaatccacaactcagtgaccctcag
atcagatcccccctccacccctctgtacaccctctcgatcacgagcagagccactcagag
gagagagaccgacgggacgctttctgccaaactcctccaaaccccccggatccccttcag
aacgactcactgacgtccattaatcagactgcaggaaatgacatcagattcagccgttca
tctagtgtgtttgatgatcctgagagcgtgagcatgattgacatgcgaggaagtgaggaa
gactctatgttgccaccccatagtcaagttcgacatgagctcatgcacaaccagtacaac
atgctgaaagaggaagaagaccactggcaggacgacttggccaaatggaagagtcgcaga
aggagtgtgtctcaggacctgatcaaaaaagaagaggagaggaaaatgatggagagactg
ttaagtggaggaggaggatcacagagaagaaaaagcatcaagacgtacagagaaatagtg
gaggagaaggagcgtcgtgaacaggagttgcatgaagcctaccggagcgcccgcacacca
gaggaagcagcatctgtgctgcagcgttatgccctgcgcttcaccatcagtgaggccgtt
ctcgagcgcctcaaactccccaagctcctggagaggagtgtgtcggccgacccaactcgt
cactcctcgttccccgtctcttcagacatctcctgctctttcagtgcttgctcaaacccg
ctgcagtacctgaggcagcagtctctccccgcagccaagttcatatcctcggtggaagca
caggtgacgggatacagcacagagccgggaaacgtcagagatatggagtgtgtttcaggt
ccatctcgctcgcatgcgacagcgccctctctggctccgagaccttacagacagagcaga
agtagcactgctaaggtacagacagcacaagaatcgacatttctcatagcaaatgaaatg
gtgcgagtgaatggagaaagggaggatgatgagcagaagggaggaagaaacagagagagg
gaagaagactgtctgcagttcctctcgtctcccttccagcacacagactcagacctcaca
gatcccgatgtgtccgctggatccacacacacaccggagcgctgggagatccacagggaa
cacacacagactgaaggagcggcggtcccgcaggtcactgataaccccacagaagtgttg
gagatgaaaccagacgacactgctacagatgaagagcagacagacgagacgtgtgtgagt
gactctctgcagaccgtgattcaggcggactcttctgcacaggtcaatgaactagtaacg
gagatcccacagaatctatcagaagcatccgccgcagaatcatgcagaaccagaccagat
ttgactgaaaaggctggaaatgtgctgaatctggtgaagcgcggtgaacacttttcttgg
agtcctgaggaagagcgcaagcgtcaggagagctggcagcgagagcaggaacgcatgctt
caggagaaatatcggcgtgaacaggagaagttgaagcaggaatgggagcaggcgcagaag
gaagtggaagaggaggagaggcggtaccatgaggaggagaggaagattctggaggagacc
gtgaccccgctgacccccctgtcccctctgacccctgtgacccctcactcaccgacggca
ctgtcagtccttcccaaaacacaaaacactttgcactcccagcccgagcgggaacacagg
ctggggccagtggagaaccagacgagctctgagacctgcagacaaggggaaaacggcatc
ggtgaagcagcgcagacacacacacagagtttacagatgacagtaagcagttctcctcag
ccaggctgtgtgtcggtgggtccgagaggacgagggcgaggggagccactgcagtctcca
caggatacaccactgggcaatagagagcagaacgagacctggaataagaatacatcacaa
ccaaaacctggtggacgcaagaggtctgactctatagagaacattgggccaaatccatca
tcctcaccttcattcacagacacacaaacacctccatcaccaaacaggtctgtcagtggg
aagaaactgtgttcaagttgtggacacccacttggcaaaggtgccgccatgatcatagag
actctcagcctttacttccacattcagtgctttaagtgtgggatctgtaagggccagctg
ggcgacaccagcacaggaacagatgtgcggatcaggaacggtctgctcaactgccatcag
tgctatatccgctcccgctctgctggtcagcccaccaccctatga
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