Rhinichthys klamathensis goyatoka (western speckled dace): 130068946
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Entry
130068946 CDS
T09701
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 12-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
rkg04054
]
130068946
Pattern recognition receptors [BR:
rkg04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
130068946
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
FISNA
NLRC4_HD2
NOD2_WH
LRR_6
SAM_KSR1
Motif
Other DBs
NCBI-GeneID:
130068946
NCBI-ProteinID:
XP_056088578
LinkDB
All DBs
Position
Unknown
AA seq
683 aa
AA seq
DB search
MDCPLDFRYVTETTDLMMDDTQAALLVETGDQILDDELQRVKDQHKTSMKIKYERLFEGI
KLQGKQTLLNRIYTQLYIIEGEREGVNEEHEVLQMEKTARTQHSQDTPIYCNDIFKASPE
PGCEEEEQIKTVLTKGIAGIGKTVSVQKFILDWAEGKANQDVDFMFVLPFRELNLIRDHQ
YSLHRLLLDFHPELQDLDSKIYEECKVVLIFDGLDESRITLMFSDAQVVSDVTETSSVGV
LMSKLMKGDLLPSSLIWITSRPAAANQIPSKYIHRLTEIQGFSDPQKEEYFRKRISDEHQ
ASRIISHIRRARSLHIMCHIPVFCWISSTVLQKLLEEDLSAEIPQTLTEMYIHFLLIQIN
TKNQKYEERDPEKLLQSNREVIVKLAEVAFHQLMKGNVMFYEEDLRESGIDVTDASVYSG
ICTEIFKEESVIHQRTVYSFIHLSVQEFLAAFYVFYHHAIKHVDTFCDVIHNLHRDAIDK
ALESEKGHLDLFLRFLLGVSLESNQRLLQDLLTHTENSSGSIRRTTQYIKEKINDGHGLS
TERSINLFLCLLEVKDQTFSREIQEFVKSDKHSEKKLSPAHCSTISYMLQMSEEVLDELD
LKKYNTSDEGRRRLIPAVSNCRKALLAVCNITAQPCEMISSALQSSNSVLRELDLSNNDL
QDSGVKLLSDGLKSPNCLLEILR
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggattgtcctttagacttcagatatgtaacagagaccactgacctcatgatggatgac
acacaagcagccctgctggtggagactggagaccaaatactggatgatgaactacagaga
gtcaaggatcaacacaaaactagcatgaagatcaaatatgagagattatttgagggaatc
aaactacaagggaagcaaaccctcctgaacaggatctacacacagctctacatcatagag
ggagagagagaaggagtgaatgaagaacatgaggttttacagatggagaaaacagccaga
acacaacactcacaagacactccaatctactgcaatgacatctttaaagcctcacctgaa
ccaggatgtgaggaggaagagcaaatcaagactgttcttactaaaggcatcgctggaatc
gggaaaaccgtctctgtgcagaagttcattctggactgggccgagggaaaagccaatcag
gatgtagatttcatgtttgttcttccatttcgagagctgaacttgatccgagatcatcag
tacagtcttcatagacttctgctggactttcatcctgaacttcaagatctggactcaaag
atttatgaggagtgtaaagttgtgttgatctttgatggtctggatgaaagcagaatcaca
ctgatgttttcagacgctcaggtagtttctgatgtgactgagacttcatcagtgggtgtg
ttgatgtcaaagctcatgaaaggagatctgcttccctcttctctcatctggatcacctcc
agaccagcagcagccaatcagatcccctccaaatacatccaccgtctgacagagattcag
ggattcagtgatcctcagaaggaggaatatttcaggaagagaatcagtgacgagcatcaa
gccagcagaatcatctcacacattagaagagcaagaagcctccacatcatgtgccacata
cccgtcttctgctggatctcctccactgtgcttcagaagctcctggaagaagatctgagt
gcagaaatccctcaaactctgactgaaatgtacatccacttcctgctgattcagatcaac
acaaagaatcagaagtatgaagagagagatccagagaaactcctgcagtccaacagagaa
gtgattgtgaaacttgctgaagtggctttccatcagctgatgaagggcaatgtgatgttc
tatgaggaggacctgagagagagcggcatagacgtcactgacgcctcagtgtattctggg
atttgcactgagatctttaaggaggaatctgtgattcatcagaggacagtctacagcttt
attcacctgagcgttcaggagtttctcgctgctttttatgtattttaccatcatgcaata
aaacatgttgacacgttttgtgatgtgatacataatctgcatagggatgcaatagataaa
gctcttgagagtgagaagggacatctggatctgttcctgcggttcctgctgggtgtctca
ctggagtccaatcagagactcttacaggatctactgacacacacagagaacagctcaggg
agcatcaggagaaccacacagtacattaaagaaaagatcaatgatggacatggactctcc
actgaaagatccatcaatctgtttctctgtctgctggaagtgaaagatcagactttttcc
agagagattcaggaatttgtaaagtcagacaaacactcagagaagaaactctctcctgct
cactgctcaacaatctcctacatgcttcagatgtcagaggaggtgctggatgagctggac
ctcaagaaatacaacacatcagatgagggtagaagaagactgataccagctgtgagcaac
tgcaggaaagctcttcttgctgtctgtaatatcactgctcagccttgtgaaatgatatca
tcagctcttcaatcctcaaactctgtcctgagagaactggatctgagtaacaatgacctg
caggattcaggagtgaagctgctctcggatggactgaagagtccaaattgtctgctagag
atactgaggtaa
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