Rhinichthys klamathensis goyatoka (western speckled dace): 130069019
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Entry
130069019 CDS
T09701
Symbol
recql4
Name
(RefSeq) ATP-dependent DNA helicase Q4
KO
K10730
ATP-dependent DNA helicase Q4 [EC:
5.6.2.4
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rkg03032
]
130069019 (recql4)
03400 DNA repair and recombination proteins [BR:
rkg03400
]
130069019 (recql4)
Enzymes [BR:
rkg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
130069019 (recql4)
DNA replication proteins [BR:
rkg03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
130069019 (recql4)
DNA repair and recombination proteins [BR:
rkg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
130069019 (recql4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
zf-CCHC
Drc1-Sld2
zf-CCHC_5
ResIII
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
130069019
NCBI-ProteinID:
XP_056088675
LinkDB
All DBs
Position
Unknown
AA seq
1449 aa
AA seq
DB search
MDRYNDVKILLKKWEQSFFQTNNRKPNKDDIDKAPEETRQLYKEYRSLKEAKERKSSEVE
DPPNPPESHSSTTGSGCWGSHLNRKNLPAAVPKLSSDDKETLKASAQYFGMKLKNNLGAF
TKERSFSLKKATTPRRTPTKALQDTPNSSTAPTGVETHTPKSANTHPDPSAPPVQTSTEF
EDEPSDPFPSVTPSKSWSPSVGSAHKSVERLQFLRQSMTKRISSVDSGWLARCQVFDEVE
EPQKPVAGNSELTKNNNSCLPPTVRSETVSTQGQTSPKTSLQKSKSDLSEDEAQKGPVVS
SVRDNVVLDAELVSPGPHGERVYQKDNAALTGDGETCLEEPKSPAKTKKRKPRAKKDQDS
GVKTQAEGGKKTKGRKRQRGDDVDESEEQEGAVKKRRRTKKGEAAGEDQPKKGGKRKGKV
DEEDDPSSSEEKKPQKRVIPQENLLGEVDEEEARAAAYTMKNTARVKPTKNTDGNFVKIN
LKKKSHVKGFALRGAAMRKQMYMQKFQLKGERFGGGFGRGRGRFGGFNRQGDTCYKCGGT
GHWARDCQGRAPVVSSAEQQETPVEEEEFELPTLEEVARATGTLRSEPIVAPPVVGGDSS
EKAEQGEEILLNIIRPDYERPAPPPPMEPLYTPKDDGKVQDVPPEVYEALRDFGYKSFRP
GQETAIMRILSGLSTLVVLSTGMGKSLCYQLPAYLYAQRSKCITLVVSPLVSLMDDQLSG
LPSKLKAACIHSNMSKKQRETAIEKVKAGEVHVLLLSPEALVGGGHSGSGCLPPADQLPP
VAFACIDEAHCVSEWSHNFRPCYLRLCKVLRDRLGVRCLLGLTATATLSTALDIARHLDI
SDQDGIAVRSAAVPHNLQLSVSMDRDKDQALVSLLKGERFGALESVIVYCTRREETSRIA
ALLRTCLQGVLLRESSKPAPIDEDDNPVGKKKKALARKKIRKPLKWIAEAYHAGMSASER
RRVQNNFMCGELRVVVATVAFGMGLDKSDVRGIVHYNMPKSFESYVQEIGRAGRDGHPAH
CHLFLDPEGADLHELRRHIYADTVDYYTVKKLVQKVFPPCKCRQIQQKQRDLEQAAEVSD
SELLEMEVCEDTDSHQQRSETEQQTHTPHEHNTPTQTAEESDGGLKLRDECLQRPCHTHE
RAIPMQETVEALDITEESLETLLCYLELHPQQWVELLHPTLSVCKLQCYGGPQQLRKITK
LCPPVAVTLARKRMAGERVESCDALEFDVVELADTMGWQLPLVKRGLRQLQWGSGSYGGT
GRSGVHVEFSALSFYFRSYGDLTPDELDAVGAFLHGRVMAQERTQLYQLKTCFKAFRSVA
YRNCSLCMDDLEESRSHDLKELLRDYFDKRRNLDLSKHYQEEEDEEEELNKCKMRDWEGQ
ICADIRGFLCSRSDEKFSGRAVARILHGIGSPCFPAQVYGRDRRYWRKYIQFDFNEIIRL
ATQEIIRTR
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atggatcgatacaatgatgtaaaaatcctcctgaagaaatgggaacaatctttcttccaa
acaaacaacagaaagcccaataaggatgacattgataaagctccagaggagacgagacaa
ctttataaagaatatcgttctcttaaagaagcaaaagaaagaaagagctcagaggtggaa
gatccaccaaaccccccggagagtcactcatctacaactggatctggatgctggggatct
caccttaaccggaagaacctgccggctgctgtgccgaaactctcatcagatgataaagag
acgctgaaagcttcagctcagtactttggcatgaagttgaagaacaatcttggagctttt
acaaaggaacgatcattttctctgaaaaaagctacaacccctcgccgaacgccaaccaaa
gcactgcaggacactcccaactccagcacagcaccgacaggtgtagagactcacacaccg
aagtcagccaacacacacccagaccccagcgctcctcctgtacagaccagcactgagttt
gaggatgagccttcggatcctttcccttccgtgaccccctccaaatcctggtctccatct
gtgggatccgcgcacaagagcgtggaaaggctccagttcctgaggcagtccatgaccaag
aggatttcttctgtggacagtggctggcttgcacgctgtcaggtcttcgatgaggtggag
gaacctcagaaacctgtcgctgggaattcagagctaacgaaaaacaataatagttgttta
ccgcctactgttagaagcgaaaccgtgtcaactcagggtcaaacatccccaaagacttca
ttacagaagagtaaatctgacttgtcagaggacgaagcacagaaaggccctgtagtgtct
tcagtaagggacaatgtggtgctggatgcagaattggtctccccggggcctcatggtgaa
cgggtatatcaaaaagacaatgcagctctcactggagatggtgagacgtgtttagaggaa
cccaaatctcctgcaaaaactaagaaacgcaaacccagggccaaaaaagatcaagactcg
ggggtaaaaacacaggccgaaggaggcaaaaaaacaaaaggtcgaaaaagacaaaggggc
gatgatgtggatgaatctgaggagcaggaaggcgcagtgaaaaagagaaggagaactaaa
aaaggagaggcagctggggaggatcagcccaaaaaaggagggaagaggaaaggaaaagtc
gatgaggaggatgatccttccagctcagaggaaaagaaaccccagaaacgagtgattcct
caggagaatctgctgggagaggtggatgaggaggaggccagagccgctgcatacacgatg
aagaacaccgccagggtcaagcctaccaaaaacacagatgggaactttgtgaaaatcaat
ttgaagaagaagtcccatgtcaaaggatttgctttgagaggagccgcaatgaggaaacag
atgtacatgcagaagttccagctgaagggcgagcggtttggcggcgggttcgggaggggc
cggggccggttcggcggcttcaatcgtcagggcgacacctgttacaagtgtggcgggacg
ggccactgggcacgagactgtcaaggaagagctcctgtcgtgagttctgcagaacagcag
gaaaccccagtagaggaggaggagtttgagctgcccacgctggaggaagttgcccgggcg
acaggaactctgcgctcagagcctattgtggctcctcctgttgtgggcggagactcttct
gagaaggcggagcaaggggaggagattctgctcaacatcatcagacccgattatgagcgg
cctgcccctcctccacctatggagccgctctacacaccaaaggatgatgggaaagttcaa
gatgtccctccagaggtgtacgaagcgctccgagactttggttacaagtccttcaggcct
ggccaggagacggccatcatgagaatcctgtcaggtctgtccacactggtagttctgtcc
actggaatgggaaagtctctgtgctaccagcttccggcatacctgtacgcccagaggtca
aagtgcatcacgctggtggtgtctcctctggtgtctctgatggacgatcagctttctgga
ctcccgtcgaagctgaaagccgcctgcatccactccaacatgtctaagaaacagagagag
acggccattgagaaggtgaaggccggtgaggtgcacgtcctgctgttgtctcctgaagcg
ctggtcgggggaggtcactccgggtccggatgtctcccccctgcagaccagctccccccg
gtggccttcgcctgtatcgacgaggctcactgcgtgtctgaatggtcgcacaacttccga
ccctgttacctgagactgtgcaaggtgctcagggatcggctgggtgtgcgttgtctgttg
ggtctcaccgccacggccactctgtccacagcgctggacatcgcccgacacctggacatc
agcgaccaggacggcatcgctgtccgctccgccgcggtccctcacaacctccagctgtca
gtgtccatggacagagacaaagatcaggctctagtgtctctgctgaagggcgaacgcttc
ggcgctctcgagtcggtgatcgtgtactgcaccaggcgagaggagacgtcccgtatcgct
gcactgctgcgcacctgcctgcagggggtgttgttgagagagtcgtccaaaccagcgcca
atcgatgaggacgacaaccccgtggggaagaagaagaaagctctggccaggaagaagatc
cgtaagcctctgaagtggatcgcggaagcgtaccatgccgggatgtctgcgtctgagagg
cggcgagtgcagaataacttcatgtgcggggagctgcgtgtggtggtggccaccgtggcc
ttcgggatggggttggacaaatcggacgtgcgtgggatcgtccactacaacatgcccaag
agcttcgagagctacgtgcaggagatcggccgagcgggacgtgacggacacccggcgcac
tgccacctgtttctagacccagagggtgcagatttgcacgagctgcgccggcacatctac
gcagacacggtggattattacaccgtgaagaaactggtgcagaaggtttttcctccgtgt
aaatgcagacagattcagcagaagcagcgagatttggaacaggctgcagaagtctctgac
agtgagttactggagatggaggtttgtgaggacactgattcccaccagcagaggagcgag
acagaacaacagacacacactccacatgagcacaacacaccaacacagacagcagaggag
agcgacggcgggctgaaactgagggacgagtgtttacagcggccgtgtcacacacacgag
agagccattcccatgcaggagaccgtggaggccctcgacatcacggaagagagtctggag
actctgttgtgttacctggagcttcatcctcagcagtgggtggagctcctccacccgact
ctctccgtctgcaagctgcagtgttacggcgggccacaacaactgcgcaagatcaccaaa
ctgtgtcctccggtcgctgtgacgctggcgaggaagcgcatggcgggcgagcgtgtggag
tcatgtgacgcgctggagttcgacgtggtggagctggcggacacgatgggctggcagctt
cctctggtgaagagaggcctgagacagctgcagtggggctccggttcgtacggaggcaca
ggcaggagtggagttcacgtggagttctcagcgctgtccttctacttccgctcgtacggt
gacctgacgccggatgagctggacgcggtcggagcgtttctgcacgggagagtgatggcg
caggagaggactcagctgtaccagctcaaaacctgcttcaaagccttccgcagtgttgcg
taccgtaactgcagtctgtgtatggatgatctggaggagagcaggagtcacgatctcaaa
gagcttctgcgcgattactttgacaagaggagaaacctggacctgagcaaacactatcag
gaggaagaggatgaggaggaagagctcaacaaatgcaagatgagggactgggaagggcag
atctgtgctgacatcagaggtttcctgtgcagtcgcagcgatgagaagttctctggtcga
gccgtggccagaatattacacggcatcggaagtccgtgtttcccagcgcaggtgtacgga
cgcgaccgcagatactggaggaaatacattcagtttgatttcaatgagatcattcgttta
gccactcaggagatcattagaacgaggtaa
DBGET
integrated database retrieval system
