Rhinichthys klamathensis goyatoka (western speckled dace): 130069095
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Entry
130069095 CDS
T09701
Symbol
usp39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130069095 (usp39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rkg03041
]
130069095 (usp39)
Spliceosome [BR:
rkg03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
130069095 (usp39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
130069095
NCBI-ProteinID:
XP_056088784
LinkDB
All DBs
Position
Unknown
AA seq
497 aa
AA seq
DB search
MIAGVKRERDVDEDEDEEVRVKIGRGYVEDRRSRHCPYLDTINRSVLDFDFEKLCSISLS
HINVYACLICGKYFQGRGQKSHAYIHSVQFTHHVFLNLHTLKFYCLPDNYEIIDSSLEDI
TYVLKPTFTKPHISGLDKQGKLYRAYDGTTYLPGIVGLNNIKANDYANVVLQALSNVPPL
RNYFLEEENYRGIRRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK
NFQITKQGDAVDFLSWFLNALHGALGGTKKKSSILAKVFQGSMRIFSKKLPHPDLPPEEK
EALLLKEEYQEEMLESTFLYLTLDLPTAPLYKDEKEQLIIPQVPLFNILGKFNGNTEKEY
KTYKENFLKKFQLTKLPPYLIFCIKRFTKNNFFIEKNPTIVNFPITNVDLREYLTEEAQA
TEKFTTYDLVANVVHDGKPTEGSYRIHVLHHGTGKWYELQDLQVIDILPQMITLSEAYIQ
IWKRQDKEDGAESHKGA
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcaggcgtgaaacgggagagggacgttgatgaagacgaagatgaagaggtgcgt
gtgaaaatcggtcgtggttatgttgaagatcgcagaagccgccattgtccatatctggac
acaatcaataggagtgttttggatttcgacttcgagaagctttgctcaatctctctttca
cacattaacgtctatgcctgtctgatctgtggcaaatatttccaaggtcgaggtcagaag
tctcatgcgtacatccacagcgttcagttcacacaccacgttttcctgaatctccacacg
ttaaagttctactgcctgccagacaattatgagatcattgactcctcattagaggacatt
acatatgtgctgaaacccacattcaccaaaccgcacatctctggtttggataagcaggga
aagctgtacagagcctacgatggcactacatatttgcctggaattgtgggtctcaataat
atcaaggccaatgattatgctaatgtggtattgcaggcgctgtcaaatgtgccccctttg
cgaaactacttcctcgaggaggaaaactaccgtggaattcgccggccgccgggtgacatc
atgtttctgttggtgcagcgttttggggagctcatgcggaagctgtggaacccgcgcaac
ttcaaagcccacgtttcgccgcatgaaatgttgcaggctgtggtgttatgcagtaaaaag
aacttccagatcactaagcaaggggacgctgttgactttctctcctggttcctgaatgca
ttgcatggtgctcttggtgggacaaagaagaaatcatccatactcgctaaggtgtttcag
gggtccatgcgaatcttctcaaagaagcttccccatccagacttgcctcctgaagagaaa
gaagcccttctccttaaggaggagtaccaggaggagatgttggagtccaccttcctctac
ctgacccttgacctgcccaccgcaccgctctacaaagatgagaaggagcagctcatcatt
cctcaggttcctctcttcaacatcctgggcaagttcaatggaaacactgagaaggagtac
aagacctacaaagagaactttctgaaaaagttccagctcaccaaacttcccccatacctc
atcttctgcatcaaacgattcacaaagaacaacttctttattgagaagaacccaaccatc
gtcaacttccccatcacgaacgttgatttgcgcgagtacctcacagaagaggcgcaggct
accgagaagttcacgacctatgacctggtggccaacgttgttcatgatgggaaacccact
gagggttcctataggattcatgttctgcatcatggcacagggaagtggtacgagcttcag
gacctgcaggtgattgatatccttccacagatgatcacactctctgaggcgtacatacag
atttggaaaagacaagataaagaggatggagcagaaagtcataaaggggcttag
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