Rhinichthys klamathensis goyatoka (western speckled dace): 130069112
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Entry
130069112 CDS
T09701
Symbol
gtf2h3
Name
(RefSeq) general transcription factor IIH subunit 3
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03022
Basal transcription factors
rkg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130069112 (gtf2h3)
09124 Replication and repair
03420 Nucleotide excision repair
130069112 (gtf2h3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rkg03021
]
130069112 (gtf2h3)
03400 DNA repair and recombination proteins [BR:
rkg03400
]
130069112 (gtf2h3)
Transcription machinery [BR:
rkg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
130069112 (gtf2h3)
DNA repair and recombination proteins [BR:
rkg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
130069112 (gtf2h3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
130069112
NCBI-ProteinID:
XP_056088807
LinkDB
All DBs
Position
Unknown
AA seq
296 aa
AA seq
DB search
MASEDEVNILVLVLDVNPVWWGQQAQREPKFTLSTCLDALMVLANAHLVMSRTNKLAIIA
NLYHESHFLYPSKQWKSGDEISGSTDGKYELLSATNDLFAEEIKKLMDRSEVSGNQTDSL
LAVSLSRALCYIHRVSKEVQAGQDMKSRILVIKAAEDSTLQYMNFMNMIFAAQKKNILID
ACVLDTDSGLLQQACDITGGLYLRIPQKIALAQYLLWVFLPDTDQRSQLLLPPPVHVDYR
AACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCETAFKMPLPQVAKTKKKKVKTAN
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagaagacgaagttaatattctggttctggtgttggatgtcaacccagtttgg
tggggtcagcaagctcaacgagaaccgaagtttactctttcaacatgtttggacgcttta
atggtcctggcaaatgcccatttagtaatgtcaagaaccaacaaactagccatcattgca
aacctgtatcatgaaagccacttcctatatcccagtaagcagtggaaatcaggggatgaa
atatctggaagtactgacggcaaatacgagcttctgtcagctaccaatgacctctttgca
gaagagattaagaaactcatggacagatcagaagtcagtgggaatcagacagactcgctg
ttggccgtctctctctccagagcgctgtgctacattcatcgagtctcgaaggaagtgcaa
gctggacaggacatgaaatcaaggattttggtaataaaagctgctgaggactctacgtta
cagtacatgaacttcatgaatatgatctttgcagcacagaagaagaatatcctgattgat
gcctgtgtgttggacaccgactcaggactattgcaacaggcttgtgatattactggaggc
ttgtatctccgaattcctcaaaagattgctctggcacagtatttgttgtgggtgtttctg
ccagacacagaccagcggtctcagctgttactgcctcctccggtgcacgtggactacagg
gccgcttgcttctgccaccgcaacctcattgaaatcggctacgtctgttcagtgtgcctg
tcaatattctgtaacttcagtccaatctgcacaacatgcgagactgcttttaaaatgcca
ctgcctcaggtggctaaaaccaagaagaaaaaagtcaaaactgcaaactga
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