Rhinichthys klamathensis goyatoka (western speckled dace): 130069126
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Entry
130069126 CDS
T09701
Symbol
abca7
Name
(RefSeq) phospholipid-transporting ATPase ABCA1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg02010
ABC transporters
rkg04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
130069126 (abca7)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
130069126 (abca7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rkg02000
]
130069126 (abca7)
Transporters [BR:
rkg02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
130069126 (abca7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
130069126
NCBI-ProteinID:
XP_056088824
LinkDB
All DBs
Position
Unknown
AA seq
2330 aa
AA seq
DB search
MAIGTQLYLLLWKNFTYRWRNKVQMIIELLWPLFLFFILIAVRQSHPPYKQSQCHFPNKP
LPSAGTLAWVQGIVCNVNNPCYHHPTPGETPGRVSNFDNSILSRLLVDIRTVLTISGNRT
GLSGLQDLSQAIQRLGERPDAWPNLPVGEYLRANESFSSFLRTNTSLSSASVDQLLRARL
NLQVVALAGGGVRLSDIVCNASLLGLYLSTEEGDSLPELQGALCSVPSAVMQKAEQIFLS
QLDFSQILTRDRLQANAADLRLISRSVSSVTQELASVMDDISSLSSFSELNSEMRLLTPE
HRVALPRESFRAFSRIMCGHTEPGGERIPSFNWYEDQDIKSFLGRNVSEETDLDNSNSTT
PFCENLIRSLESNPLSRIVWRGIKPLFIGKLLYTPDTPVTRTVMSQVNRTFQDFQILNDV
QEAWQEVGPRIKSFMESSVEVRLLQDLLRRPEVAVVVNLRLENTSWTASRISRFLSTPDP
DTPRRKGAPPTWLDLYLDVNNTFSTLSELTKCFSLNKLEGLSTEGELVERALELLEDRQF
WAGIVFLLPDPSSSSLPPHVKYKIRMDIDDVTRTNKIKDKFWDPGPAAEPFSDLLYVWGG
FIYVQDLVERAVTHLLTGKEPNTGIYVQQMPYPCFVDDVFIRVLNRSLPLFMTLAWIYSV
AMIIKGVVYEKEARLKETMRIMGLSSGMLWLSWFVSSVLPFLFSAGLLIAALKWGDILPY
SDPAVVFFFLTAFATATIMLCFLISTFFSRANLAAACGGLVYFTLYLPYVLCVAWREYLT
STHRILASFLSPVAFGFGCEYFSQYEEQGVGIQWFNLRSSPMEGDGYTFTTSIVMLYVDA
VIYALATWYIEAVFPGQYGIPRPWYFIFQLNYWGGVPLEVGLPIPAALREETDDRIEAEP
PSLILGVSIRNLVKIYKKGSKLAVNHLNMKFYEGQITSFLGHNGAGKTTTMSILTGLFPP
TAGTIYVKGMDIRTDMDIIRRTLGVCPQHNVLFDILTVEEHVWFYGRMKGISMEEVEKEI
DSLLEDVGLQHKRHEQTKNLSGGMQRKLSVAIAFIGGSKVVVLDEPTAGVDPYSRRGIWD
LLLKYREGRTIILSTHYMDEADLLGDRIAIISQGKLCCCGTPLFLKARLGTGYYLTLVKR
EMQRTPSSISTAKLPSAAASKDSESSLSDDTGLGSEENGFDAAALMALAQQYVSDAQLVE
DIGREAVINLPHAASEDGSLALFLNELDKRQGEFGVVSYGLSDTTLEEIFLRVAEETGVD
ADPEEPPASAGHQGAPPEDRDTVRKQPIRKEAQESEPLSGDGQGAGAPLTGVLLTCQQLR
ALFTKRLKYALRSRRGMFAQIVLPAVFVLIALLFSLIVPPFGKYPSLELQPWIYGEQFTF
FSNDAPQDPAIQNLLDALLDPPGFGTKCMDPSSDIECLEEAETKFVRPQIPYSMWQLFHK
GNWTVEKPSPDCKCSAEHIRMMLPDCPQGAGGIPPPQIKQMTGDILQNLTGRNISDYLVK
TYAQILKKSLKTKKWVNEFRYGGFSLGAESSPAVDEPRHLEESVWAIRRRYNIAENGSLD
QLLHRLPDVLMGLTSQNNVKVWFNNKGWHAMAAFVNIMNNGLLRANLPPDMERRKYGITA
YNHPLNLTKEQLTEMALMATSVDVLVSICVIFAMSFVPASFVLFLIEERVSKAKHLQFVS
GVKPILYWTTNYAWDMLNYTVSAAMVVFIFISFQQESYVSEKNLPALVLLLLLYGWSITP
LMYPASFIFSVPSTAYVVLTSINLFIGINGSIATFVLELFVDEHLNEVNRILKKVFLIFP
HFCLGRGLIDMAKNQAMADAFQRLGTKQNLDPLSWDFVGKNLFAMAMEGIVFFIFTVLLQ
YKFFVNFSRWSGFVLPPLGTEDEDVARERDRVKNGRALGDILTLTDLSKVYKAGGKPAVN
RLCLGIPRGECFGLLGVNGAGKTSTFRMLTGDTRITYGEAFLSNHSVLTEMEKVHQLMGY
CPQFDAISDLLTGREHLEFYARLRGVPEAHVAKVAQWGVQKLGLSQYAEREAGKYSGGNK
RKLSTAISLIGAAPVIFLDEPTTGMDPKAKRFLWNCILSVIREGRSVVLTSHSMEECEAL
CTRMAIMVNGRFQCLGSVQHLKNRFGDGYTIILRLSRPSTEPCPVDSYIKNSFPGIQLKE
RHQNVLHYQLPSQTCSLARVFEVLSNNNEELGIADYSVSQTTLDQVFVNFAKDQTDDDQL
REVTVNGGSVARLQRPTDLKLERCSRSSGPHSPSDQGARSEQSPEPPSTGLKTKQNKPAS
PSVSGRQQQIRMEPVGEAANGSTPPEDQTPARKDPSTLFIVSTKTQESKV
NT seq
6993 nt
NT seq
+upstream
nt +downstream
nt
atggccataggaacgcagctctatctgctgctgtggaaaaacttcacgtaccgctggaga
aacaaggtccaaatgataattgaacttctgtggccgctcttcctcttcttcatcctcatt
gctgtccggcaatcacacccgccatataaacagagccagtgtcactttcccaacaagccc
cttccttcagcgggcacactggcatgggttcagggcatcgtctgcaatgtcaacaatccc
tgttatcatcaccccactccaggagaaacacccgggcgagtgagcaacttcgacaactcc
atactctctcgacttctggtggatatcaggactgtcctgaccatcagtggtaaccggacg
ggcctctccggcctgcaggacctgtcgcaggcaatccagagactcggggagagaccagat
gcctggccaaatcttccagttggagagtatctcagagccaatgaaagcttctcctccttc
ctgcggacgaacaccagcctctcctcggcatctgtcgatcagttactgagggcacgactg
aacctacaagtggttgcattagcaggtggaggagtgcgtctgtctgatatcgtctgcaat
gcttcactcctgggcctttacctcagcacggaggaaggagactctctccctgagctgcag
ggggcgctgtgctctgtgccctcggctgtaatgcagaaggcagagcagatcttcctctca
cagctggacttcagccagatcctcacgagagacagactgcaggcaaacgcggcggatctc
cggctcatcagtcggtctgtttcctctgtaactcaggaactagcatcagttatggatgat
atctcttctctgtccagtttctcagagctgaattcagagatgaggctcctgacacctgag
caccgtgtagcactgccacgcgagagcttccgtgccttctccagaatcatgtgtggacac
acagagccagggggagagagaatcccttccttcaactggtatgaagatcaggacatcaaa
tctttcctgggcagaaatgtgtcagaggagacggacctcgacaacagcaacagcaccact
ccgttctgtgaaaacctgattagaagtctggagtcgaaccctctctcacggattgtgtgg
cgaggaattaaaccactgttcattggaaagctgctatacacaccagacacaccagtcacc
cgtacggtcatgtcacaggtaaacagaacgttccaggacttccagatcctgaatgatgtg
caggaggcgtggcaggaagtcggtcccagaatcaaaagcttcatggagagcagtgtggaa
gtgcggcttctgcaggatcttctgagaaggcctgaggtggcggtagttgtgaacctacgt
ctggaaaacacatcttggacggcctctcgcatctcccggttcctctcaacgcctgaccca
gatacaccccgtaggaaaggagcgccgcccacctggttggacctgtacctggatgtgaac
aacaccttcagcactctgtcagaactcactaagtgcttctctttgaataaacttgagggt
ttgtccacggagggtgagctcgtcgaacgagccctggaactgctggaagaccgccagttc
tgggccgggatagtcttcctcctcccagacccttcctcatcctctttgcctcctcacgtc
aagtacaagatccgcatggatatagatgatgtaacccgcacaaacaagatcaaagacaaa
ttttgggatccaggcccggctgctgaaccattcagtgaccttctctatgtctggggcggt
ttcatttacgtacaggatttagttgagagagctgtgacacatttgctcactggcaaagag
ccgaacacgggcatatacgtgcagcagatgccttacccctgcttcgtggatgacgttttc
atacgtgtcctgaatcgttcgttgcctctgttcatgacactggcgtggatctattctgtg
gctatgatcataaagggcgtggtctatgagaaagaggctcgcctgaaggagacgatgcgg
atcatgggcctgagctctgggatgctgtggctcagctggttcgtcagcagtgtcctgccc
ttcctgttcagcgccggactcctcatcgccgccctgaagtggggagatatcttaccctac
agtgacccggctgtggttttcttcttcctgactgcatttgctacagccaccatcatgctt
tgcttcctcatcagcacattcttctcgcgtgctaacctggcagccgcgtgtggaggactc
gtttacttcaccctttacctgccgtatgtgctgtgtgtggcctggcgagagtacctgacc
agcacacacaggatcttagcgagcttcctgtctccggtggcctttggtttcggctgtgag
tatttctctcagtatgaagagcagggtgtggggatccagtggtttaacttaagatccagc
cccatggagggagacggctacaccttcaccacctccattgtgatgctgtatgtggatgct
gtcatctatgcactggccacttggtacatcgaagctgtttttccagggcagtacgggatc
cccaggccgtggtattttatcttccagctgaattactggggtggggttccactagaggtg
gggttgcccatccctgcagctcttcgagaggaaaccgatgatcggattgaagctgagccg
ccaagtctgattctaggagtttccataaggaacttagtaaagatttataaaaaagggtcc
aagcttgctgtcaatcaccttaacatgaagttctatgagggccagataacctcttttctg
ggtcacaatggagctggcaagacaaccaccatgtccattctaacgggactgtttcctccc
accgccggtacgatatacgtgaagggaatggacatccgcacagacatggacatcatccgc
aggactctgggagtctgtccccagcacaacgtcctctttgacatcctgaccgtggaggag
catgtgtggttctatggtcgaatgaagggcattagcatggaggaggtggagaaagagatc
gattcacttctggaggatgtggggttacaacacaagcgacatgagcagactaaaaacctc
tcgggtggcatgcaaaggaaattgtctgttgcaatcgctttcataggtgggtcaaaggtt
gtggtgttggatgaacccacagctggtgtggacccctactcccgccgcgggatctgggac
cttctgctcaaataccgtgaaggccgcaccatcattctgtccacacattacatggacgag
gctgatctcctcggtgaccgcattgcaatcatttcccagggaaagctgtgctgctgtgga
acgccactcttcctcaaggcacgtcttggcacgggatactaccttacgctggtcaagaga
gagatgcagaggacgccgagcagcatcagcaccgccaaactcccttcagctgcagcaagc
aaggacagcgaatcctcattaagtgatgacacgggactgggcagtgaagagaatggattc
gatgccgctgccctaatggctctcgcacagcagtacgtgtctgatgctcagctggtggag
gacattggcagagaggcggtcatcaacttgccccatgcggcctctgaggacggcagtctt
gccctcttcctgaacgagctggacaagcggcagggcgagttcggcgtggtcagttacggg
ttgtcagacaccacgctagaagagatctttctgcgtgtggcagaggagacaggtgtggat
gcggaccctgaggagccgccagcatctgcgggccaccagggggcgccacctgaggaccga
gacacagtacggaaacagccaatcaggaaagaggcgcaggagagcgagccgctgagcggg
gacggccagggtgccggcgcgcctctcacgggcgtcctcctgacgtgccagcagcttcgg
gcgctgttcaccaaacgactgaagtacgcgctgcgcagccgcagaggcatgtttgcacag
attgttcttcctgcagtttttgtccttatcgctctgctcttcagtctcatcgtcccaccc
ttcgggaaatacccatccctggagctccagccgtggatttacggggaacagttcaccttc
ttcagcaatgacgccccacaggacccagccatacagaacctcctggatgccctgctagat
ccacccgggtttggtactaaatgtatggatccgagcagtgacatagagtgtttagaggaa
gctgaaacaaagtttgtccggccccagatcccctacagcatgtggcagctctttcacaaa
ggcaactggactgtggagaagccgtcccctgactgtaagtgcagtgctgaacacatccgc
atgatgctgccggattgcccacagggagccggaggaatcccccctcctcagatcaaacaa
atgactggagatatcctgcaaaatttgacaggtcgcaacatttctgactacctcgtcaaa
acatatgcccaaattctgaagaaaagtttgaagacgaaaaaatgggtaaatgaatttaga
tacggaggcttctctctgggggctgaaagctctccggctgtggatgagccacgtcaccta
gaggagtctgtttgggctattagaagacgctacaacattgcagagaacggctctttagat
cagctccttcacagactaccagatgtcctgatgggactcaccagccaaaacaatgtgaag
gtctggtttaataataaaggatggcatgccatggcagcatttgtgaatattatgaacaat
ggtctccttcgtgccaacttgccacctgacatggaaagacgcaaatatggaattacagcc
tacaatcacccactcaacctcaccaaggagcagctgaccgagatggccctaatggctacc
tcagtggacgttctggtgtccatatgtgttattttcgccatgtcgtttgttcctgccagt
tttgtgctgttccttattgaggaacgagtcagtaaagctaaacatctgcagtttgtcagt
ggagtgaagccaatcctgtactggactaccaattacgcttgggacatgctgaactatacg
gtatcggccgctatggtggtcttcatcttcatcagcttccagcaggaatcatatgtgtct
gagaagaatctgcctgcactggtgctccttcttttgctctatggttggtctatcactcca
ctcatgtacccagcctccttcatcttctccgtccccagcactgcctatgtggtcctcacc
tccatcaacctcttcattggcatcaatggcagtatcgccaccttcgtcttggagctgttt
gtcgatgagcatttgaatgaggtgaacaggatcctgaagaaggtcttcctgatcttccct
cacttctgtctgggtcgaggtctcatcgacatggccaagaaccaggccatggcagacgca
tttcagcggctgggaaccaaacagaatctggaccctttatcctgggattttgtcgggaag
aatctgtttgccatggcgatggaaggaattgtgttcttcatcttcactgttctcctgcag
tataaattctttgttaattttagccgctggtcggggtttgtgctgccccccctgggcacg
gaggatgaggatgtggcgagagagagagaccgtgtgaagaacggtagagctctgggagac
attctcaccctcacagacctcagtaaggtctataaggcaggcgggaagccagcagtgaat
cggctttgcttgggcattcctcggggagagtgttttgggcttcttggtgttaatggggct
gggaaaacctcaaccttccgcatgctgaccggagacacccgcattacttacggagaagca
tttcttagcaaccacagtgttcttaccgaaatggagaaagtgcatcagctgatgggctac
tgtcctcagttcgatgccatcagtgacctgctgacaggccgggagcacctggagttctac
gctcgcctcagaggagtgccagaagctcatgttgcaaaggtggcacagtggggagtgcaa
aagcttggtctgagtcagtatgctgagcgagaggctgggaaatacagtggaggaaataag
cgcaaactctccaccgccatttcccttattggagctgcacctgtcatcttcttggatgag
cctacgactgggatggacccgaaggccaagcgcttcctctggaactgcattctcagtgtg
atcagagagggaagatctgttgttctcacctctcacagcatggaggagtgtgaggctctg
tgcacccggatggccatcatggtgaacggccggttccagtgtctgggctcggttcagcac
ctgaagaacaggtttggagacggctacacaataatccttcgtttgtcccgcccgtctaca
gaaccgtgcccagtggactcctatatcaagaactccttccccgggatccagctgaaggag
agacatcagaacgttctccattaccagctgccatctcaaacctgttcgctcgctcgcgtc
tttgaggttctgtcaaataataacgaggagctggggatagctgactactcagtgtcacag
acgacactggatcaggtgtttgttaactttgctaaagaccagacagatgatgatcagctc
agggaagtcacagtaaacggtggatccgtggcgagacttcagcggcccacagacctcaaa
ctggagagatgcagccggtcttccggaccacactctccgtcagatcaaggtgctcgctca
gaacaaagccctgagcctccatctactggtttaaagaccaaacagaataaaccagccagt
ccgtcagtctcaggacggcagcagcagatccggatggagcctgttggcgaggcagctaat
ggatccactcctcctgaagaccagactcctgcgagaaaagacccatccacgttatttatc
gtcagtaccaaaacacaggagagcaaagtgtga
DBGET
integrated database retrieval system
