Rhinichthys klamathensis goyatoka (western speckled dace): 130069319
Help
Entry
130069319 CDS
T09701
Symbol
mnat1
Name
(RefSeq) CDK-activating kinase assembly factor MAT1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03022
Basal transcription factors
rkg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130069319 (mnat1)
09124 Replication and repair
03420 Nucleotide excision repair
130069319 (mnat1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rkg03021
]
130069319 (mnat1)
03400 DNA repair and recombination proteins [BR:
rkg03400
]
130069319 (mnat1)
Transcription machinery [BR:
rkg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
130069319 (mnat1)
DNA repair and recombination proteins [BR:
rkg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
130069319 (mnat1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-RING_UBOX
TRAF3_RING
zf-UDP
zf-C3HC4
DUF604
zf-RING_2
DUF2096_N
OrtA
pre-PUA_NIP7
TRAF6_Z2
zf-P11
Motif
Other DBs
NCBI-GeneID:
130069319
NCBI-ProteinID:
XP_056089106
LinkDB
All DBs
Position
Unknown
AA seq
309 aa
AA seq
DB search
MDDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDMLFVRGSGNCVQCNTPLRKSNFRV
QLFEDPAIDKEVEIRKKVLKIYNKREFDFSTLKEYNDYLEQVEDIVFNLTNNVDVDSTKQ
IMEQYQRDNRDVIQKNKAKLTREQEELEELLLLEQQDSEQRRLETLQEEQRQLQAKRKNK
QALLDKLESSKLPAAVLLAQHKDRAAQLETQIEKQKQNVKPTNIFSTGIMIGQTVSLASV
SRVEEVLYVYQPVYIDTYGPPVPELDQLGRQGYLNHVRTASPQDQAGGYTSGLACHRAIQ
DAFSGLFPL
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggatgatcagggatgcccgaggtgcaagacgactaaatacagaaatccatctctgaag
ctgatggtcaatgtgtgtggacacacgctgtgtgagagctgtgtggacatgctgtttgtc
cgtggctcaggtaactgtgtgcagtgtaacactcctttaagaaagagtaatttccgcgtg
cagcttttcgaagatccagccatcgacaaagaggtggagatccgcaagaaggttctcaaa
atttataataagagggaatttgatttttccactctgaaagaatataatgactacctggag
caggtggaggacattgtgtttaacctgactaataacgtagatgttgacagtaccaagcag
ataatggaacagtaccagcgagataacagagacgtgatacagaaaaacaaagccaagctg
acacgtgagcaggaggagttggaggagctgttgttactggagcagcaggattcagagcag
aggagactggagaccctgcaggaggaacagagacaactacaggccaagaggaaaaacaaa
caggccctgctggataaactggagagttccaagttacctgcggctgtgcttttggcccaa
cataaagatcgagccgcccaactggagacccagatagaaaaacagaaacaaaacgtcaaa
ccaacaaacatcttctctactggaataatgattggtcagaccgtgtctttggcatccgtg
tctcgtgtggaggaggtgttgtacgtctatcagcctgtgtacattgacacatacgggcca
cccgttccagaactggatcagttgggcagacaagggtatctgaatcatgtgcgcacagcg
tcccctcaggatcaggctggtggttatacatcaggactggcctgccatcgtgccatccag
gacgctttcagtggcctcttccccttgtga
DBGET
integrated database retrieval system
