Rhinichthys klamathensis goyatoka (western speckled dace): 130069346
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Entry
130069346 CDS
T09701
Symbol
cdhr5a
Name
(RefSeq) cadherin-related family member 5
KO
K16505
cadherin-related family member 5
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rkg04515
]
130069346 (cdhr5a)
Cell adhesion molecules [BR:
rkg04515
]
Cadherins
Cadherin related
130069346 (cdhr5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
130069346
NCBI-ProteinID:
XP_056089146
LinkDB
All DBs
Position
Unknown
AA seq
707 aa
AA seq
DB search
MQFKRKSTTTIFGCVFAVFLPKICFADKICTAPSEPVTIKENNADDTVVVHINTTTKDVT
LNLTENPGNSFYLRGSELIAKKGLDFETLSGPEELTVQVRCNKTGYRSITLIVIVRVENI
NDNNPSFGQSEYTLNVNELTPVNTSIGLIEAIDDDSEVLYYSIEPTLNRYFRLENMYTPK
ILVNKVLDYDVIQQVKLILYAQDTPLPLQHTPLPSQPSERSFTATATITVNIKDIDNRPP
WFQPCTRVTTGNAKICLSLGYRGRVNLTEKQDGALQLQPGPVYARDGDKSRNEEISYKIV
RGNEDNIFQIDENSGNISMLKPADIAGPISLLVLASQVLNRDQFATTSVTIDVMKKSRNP
PRFEKERYEGYVYISSGPENMVLRDRTTNRPFRVRARDEDFASGINPDIKYEVQYSSYVN
ITTDGFILLKKAVRTDSFALQLRAVDVSTGESGTAALAVLVIPSAGVQSPDESFRAGDMA
LLGFVMAALLVLCLIVIGYLISRVKKGNPDAFKLSECLGSCLKFTQPPNRPRPRDSMQFN
NDGFLNEGDTGRSRARRAELREGRLDAVQAARVRVIPRERLRHCRSCGLQTSFNHSHHSP
VVQTKGKANKQRVKSILAKERRKDDRHKSVWFKESEDSSDIEVEIIPDTIGIKPEEEVEK
VEGDFASHPLEDSQMELGDLIMSNIQDLSSREISDGRDGLNTDRKDP
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttaagcgtaaatccacaacgaccatcttcggctgtgtatttgcagtattcctc
cccaaaatctgctttgctgataaaatttgtacagccccttcagagcctgtgacgattaaa
gagaacaacgcagatgacacagtcgttgtccatattaacacaacaacaaaggatgtaacg
ctgaatctcacagagaatcctggaaactcattctatctgagaggttcagaactgatagca
aagaaaggcctggactttgaaacactttcaggtcctgaagagctaactgtgcaggtccgg
tgtaataaaactggatacagaagtatcactctgattgtgattgttcgtgttgagaatatc
aatgacaacaatccttcatttggccagagcgagtacacacttaacgtaaatgagctcaca
ccagttaataccagcattggcctgattgaagcaatcgatgatgattctgaggttctgtat
tattctatagaaccaactttgaacagatacttcagacttgagaacatgtatacgccaaaa
atccttgtgaacaaagttttagattacgatgtcatccaacaagtgaaactgatcttgtat
gcacaggatactccactgccattgcaacatactccactgccatcacaaccgagtgaacgc
tccttcacagctacagcaaccatcaccgtcaatattaaagatattgataaccgtcctccg
tggtttcaaccatgtacaagagtaaccactggtaatgccaaaatctgcctgagcctcggc
tacaggggcagggtgaacttaacagagaagcaggatggagccttgcagttgcagccaggt
ccagtgtatgccagagatggagataaaagcagaaatgaagagataagctataaaattgtt
cgaggaaatgaagacaacatatttcagattgatgagaactccggcaacatatcaatgctg
aaaccagcagatatagcaggcccaatctccctcttagttttggcttcccaggtattaaac
cgagatcagtttgccaccacttcagtcaccattgatgtaatgaaaaagagcagaaatcct
ccgaggtttgagaaagaacgatatgaagggtatgtttacattagttcagggcctgaaaac
atggtgctaagagacaggacgaccaacagacccttcagagtcagagcaagggatgaagat
ttcgcaagtggaatcaatcctgacataaaatatgaagtgcaatacagcagctatgtcaat
atcacaacagatgggtttatacttttgaagaaagcagttcggaccgattccttcgctttg
cagcttcgggcggtggacgtgtccactggtgagtcagggaccgctgctctcgctgtcctt
gtcataccatccgcgggggtccagtcgcccgacgagagcttccgcgcaggagacatggct
ttactgggcttcgtaatggccgctttactggtgctctgcctcattgtgatcggctatctg
atatcccgtgtcaagaaggggaatcctgacgcgttcaagttgtctgagtgtttagggtca
tgcttgaagtttactcagccccctaacaggccaagaccgagagatagcatgcagttcaac
aatgatggtttcttaaatgaaggagacacagggagatccagagccaggcgagctgaactg
agagaagggagactggatgcggttcaagcagcaagagtgcgagtgattcctcgtgaaaga
ctgaggcactgccgatcctgtggactccagacgagtttcaaccattcccatcacagtcca
gtcgtccaaaccaaagggaaggccaataagcagagagtcaagtccattctggctaaagag
aggaggaaggatgacagacacaagagcgtctggttcaaggagagcgaggattcttcagat
atcgaggtggagatcatccctgacactatagggattaagcctgaagaggaggtggagaag
gtcgaaggggatttcgcttcccatccactggaagacagtcaaatggaattaggggatttg
ataatgtcgaatatacaggacttgagtagcagggagatttctgacggcagagacggactg
aatacagacagaaaggatccgtga
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