Rhinichthys klamathensis goyatoka (western speckled dace): 130069347
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Entry
130069347 CDS
T09701
Symbol
neo1a
Name
(RefSeq) neogenin 1a isoform X1
KO
K06766
neogenin
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04350
TGF-beta signaling pathway
rkg04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
130069347 (neo1a)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
130069347 (neo1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rkg04515
]
130069347 (neo1a)
Cell adhesion molecules [BR:
rkg04515
]
Immunoglobulin superfamily
DCC/UNC5 family
130069347 (neo1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
V-set
Tissue_fac
SusE
Arylsulfotran_N
EphA2_TM
DUF7359
Motif
Other DBs
NCBI-GeneID:
130069347
NCBI-ProteinID:
XP_056089147
LinkDB
All DBs
Position
Unknown
AA seq
1449 aa
AA seq
DB search
MAERGARLLLSLFCLTITLSHAEKGSALRNFSPFQFSTEPSDTLVVRGALALLNCSVHGE
SPAKIEWKKDGSFLSLASDDRRQVLADGSLLISSVVHSKHNKPDEGVYQCVATIDNLGTI
VSRTARLNVAGIPRFLSQPEAASVRVGDSHVMNCEVNPDLVPFVRWEGNKEPLELDQRVF
ALASGALVISNSSEADTGLYRCVIENAGPIKTSEEAHLHVLPESGEERTLEFLLEPQPVS
RVVGESVLLPCVVTGYPTASVTWMHRDQLIEDSTGRFEVLGGGSLQIFNLTEEDAGVYNC
LADNVNGSIEAQAELTLRASPQFLKKPANVYAHEATDVIFECEVTGSPAPTIKWVKNGDA
VIPSDYFKIIKEQNLQVLGLVKSDEGFYQCLAENDAGNVQSSAQLIILDQDVALPSPPPT
SLTRATTDHLMPGSRVGAGPKPSGPRDVVASLVSTRFIKLTWRVPAEPHGEDVTYSVYYI
LEGTNRHRIVNTSRPGEMQVTIQNLMPDSTYAFRVVAHNRNGPGESSAPLRVATQPEVQV
PGPAPNLHAVVTSPSTVSLSWDVPLIGNGEILNYKIYHMEKGMDTEQDLDVNTLSYTMTG
LKKFTEYSFRVVAYNKHGPGVSTEDLSVRTYSDVPSAPPQNMTVEVLNSKSIMIRWQPPP
ADAQNGEIIGYKIRYRKGTRKSEVAEITSGSQLYQLIDGLQRGTEYMLRVAAISVNGTGP
ATDWTTAETFESDLDETSVPDVPSSLHVRPLVNSIVVSWTPPENQDIVVRGYSIGYGIGS
PHAQTIKVDYKQRYYTIENLNPSSHYVITLKAYNNVGEGIPVYESAITRPQSDPIDPDVD
LYELFHAPYTPVPEPLPMLPPVGVQASVLSHDNIKVTWADNSLPKNQKITDARYYTVRWK
TNIPANTKFKVANTTTLTHTVVGLKPNTLYEFSVMVTKARRTSTWSMTAHGTTFETIPSS
APKDVTVVSKEGRPRTIIVNWQPPSEANGKITGYIIYYSTDVNAEVHDWVIEPVVGNRLT
HQIQELTLDTTYYFKIQARNSKGMGPMSEAVQFRTPKAEPSDKMANDQASGPVKLGRPSS
PDQGFGSGGKPDMSGTGDNHILVIVIIVSVGAFTIIVVVVGAFLCTRRTTTQQKKKRAAC
KSANGSHKYKGNSKDLKPPDLWIHHERLELKPIDKSPETNPVMTDTPIPRSSQDITPVDG
SMDPMLQRRNSYRGHESEDSMSTLASRRGMRPKMMMPFDAQPPQPVISAHPIHSLDNHHH
HYHLGSLASPTRSYLHHQSSTRSIATPISHLDRAESTESVRNTPSADLLPPSGQPSCTTD
LSETDISYHSSVTEEEPAFATPTAHVRPTHPLKSFAVPAVPAHPMYDSAALPSTPLLSQT
GPHSVKTASIGTLGRTRTPMPVIVPSAPDGSEGIRLHEDAGSNYETDELTEEMAHLEGLM
KDLNAITTA
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcggggagcccggctgctcctctctcttttctgcctcacgatcacactttca
catgctgaaaaaggatcagcattgaggaacttcagcccattccagttctccacggagccg
tcagatacgctggttgtgcggggagcgctggcgctgctcaactgctcagtccacggcgag
tctcctgccaagatcgaatggaagaaagacggctctttcctcagcctggcctcagatgat
cgcaggcaggtcctggcggacggttctctgctcatcagctcagtggtgcactctaagcac
aataaacccgatgaaggggtttaccagtgcgtggccactatagacaacctgggcaccatc
gttagccgtacagctagactcaatgttgcaggaataccgcggttcctcagtcagccggaa
gcggcgtcggtgcgggtcggggacagtcacgtgatgaactgcgaggtcaaccctgacctg
gtgcccttcgtccgctgggaaggaaacaaggagccgctggagctggatcagagagtgttt
gcgctggccagtggagctctggtcatcagtaactccagcgaggccgacacgggcctgtac
cgatgcgtgatcgagaacgccggacccatcaagaccagcgaagaggcgcacttacacgtt
ctgccggaatccggagaggagaggaccctggagtttctcctggagcctcaaccagtgtct
agagtcgtgggggagagcgtgctgctcccctgtgtggtgacgggatatcccacagcctcc
gtcacatggatgcacagagaccagctcattgaggacagcacgggccgcttcgaggtgctc
ggcggaggcagtctgcagatcttcaatctcaccgaggaagacgccggtgtgtacaactgt
ctggcagacaacgtcaacggatccatcgaggcccaggctgagctcacgctgagagcttcc
ccacagttcctgaagaaacctgctaacgtatatgctcatgaagccacagatgtaatcttc
gagtgtgaggtcaccggctcaccggctcccaccatcaaatgggtgaagaacggagatgcc
gtcattcccagcgactatttcaagatcattaaggagcagaacttgcaggtgctgggactg
gtcaagtcagatgaaggtttctatcagtgtttagctgagaatgacgctggtaatgtgcag
tcgagtgctcagctcatcatactggatcaagatgtagccctgccctccccccctcccacc
tcactgacccgtgccactactgaccatctaatgccagggtcccgagtcggcgctggaccc
aaaccctccggcccgcgggacgtcgtggcctcactggtgtccactcgcttcatcaaactg
acctggcgtgttcccgccgaaccacacggagaagacgtcacctactccgtctactacatc
ctggagggcactaacaggcacaggatagtgaacaccagtcgtccaggagagatgcaggtc
accatccagaacctcatgccagactccacgtatgcctttcgtgtggtggcgcacaacaga
aacggccctggagagagttcagcgcctctgagagtagccacccagcctgaagtccaggtt
cctggtcctgctcctaaccttcatgcagtggtcacgtccccctccacagtgagtctcagc
tgggacgtgcccctcataggcaatggagagatcctaaactacaagatctatcacatggag
aagggcatggacactgagcaggatctggatgtgaacacactgtcctacaccatgactggc
ctgaagaagttcacggagtacagtttcagagtggtggcctacaacaaacatggacctggg
gtctccactgaggacctttctgtgcgcacatactcggatgtccccagcgctccgccacag
aacatgacggttgaagtgctgaactcgaagagcatcatgatcagatggcaacctccaccg
gcagatgctcagaacggtgagatcatcggctacaagatccgctacaggaaggggacgagg
aagagcgaggtggcggagatcacttcaggatcgcagctctatcagctcatagatggcctg
cagcgaggcactgaatacatgttgcgagtggcggccatttcggtgaacggcacgggtccc
gccacagattggaccacggctgagacgttcgagagcgatctggacgagacaagcgtgccg
gacgtccccagctccttacatgtacggcctctggtgaacagcatcgtagtgagttggacg
cccccggagaaccaggacatcgtggtgaggggttactctatcggctatgggatcggcagc
cctcacgcacagaccattaaagtggactacaaacagagatactacaccattgagaacttg
aatcccagctcacactacgtcatcacactgaaggcctacaacaacgtgggggagggaatc
cctgtgtacgagagcgccatcacacgaccccagtcagaccccatagaccctgatgttgat
ttgtacgaacttttccatgctccatacactccagtaccagaacctttacccatgctgcct
cccgtgggcgttcaggcgtccgttctgagccacgacaacatcaaagtcacatgggcggac
aactcgctgcccaagaaccagaagatcacagatgcacgctattacacggtgcgctggaag
accaacatacctgcaaacacaaagtttaaggtggctaataccaccacacttactcacacg
gtggtgggtcttaagcccaacactttgtatgagttctcggtcatggtgacgaaggcccgg
aggaccagcacctggagcatgactgcacacgggacaacttttgaaacaatcccaagttct
gcacctaaagatgtgactgtagtgagcaaagagggacgaccacgaaccatcatcgtcaac
tggcagccgccttcagaagccaatggcaagatcacaggttacatcatttattacagcact
gatgtgaatgcagaggttcatgattgggtcattgaaccagtagtgggaaacaggctaacc
catcaaattcaggagctgacccttgataccacctactacttcaagatccaggcgcgcaac
tccaaggggatgggtcccatgtctgaagctgtccagtttcgcactcctaaagccgaaccc
tctgacaaaatggctaatgaccaagcttcaggaccagtgaaactaggaagaccctcatca
ccagatcaaggctttggatcaggtgggaaaccagacatgtctggcactggtgataaccac
atcctggttattgtcatcattgtgtccgtgggagcatttaccatcattgtggtggtggtt
ggcgccttcctgtgtacacgccgtaccacaacacagcagaagaagaaacgtgcagcctgc
aagtccgccaatggatcccacaagtataagggaaactccaaagatctgaagccaccagac
ctctggatccaccacgaacgtttggagctaaagcctattgacaaatcgcccgaaaccaat
ccagtaatgaccgacacgccaatcccccgatcctcccaagacatcaccccggttgacggc
tccatggatcctatgctccagagacgcaactcgtaccgtggccatgaatcagaggacagc
atgtctacactggcaagccgtcggggaatgagacctaaaatgatgatgccctttgatgca
caaccccctcagcctgtgattagtgctcaccccatccattccctcgataaccatcaccat
cattatcacttgggcagcctggcctcgccgacacgcagctatctccaccaccagagcagc
acacggtccatcgccacccccatctctcatctagacagggcagagtccacagagtctgta
aggaacacccctagtgccgacctgctccctccgtctgggcagccctcctgtaccactgac
ctttcagagacagacattagctaccacagctcagtcactgaggaggagccagctttcgct
acgcccacagcacacgttcgtcccacacacccactcaagagttttgcagtgccggccgtc
ccagctcaccccatgtatgactcggcagcattgcctagcactccattgctgtctcagaca
gggcctcactcagttaaaacagcctctatcggtacattgggaaggacgaggactcctatg
cctgtcatagttccaagtgcaccggatggttcggaaggcatcagacttcatgaagatgca
gggagtaattacgagacggacgagttgacggaggaaatggcccatctggagggcttaatg
aaggacctaaacgccatcacgacagcctga
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