Rhinichthys klamathensis goyatoka (western speckled dace): 130069440
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Entry
130069440 CDS
T09701
Symbol
syde2
Name
(RefSeq) rho GTPase-activating protein SYDE2 isoform X1
KO
K20655
Rho GTPase-activating protein SYDE
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130069440 (syde2)
Membrane trafficking [BR:
rkg04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
130069440 (syde2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGAP
C2
Ribosomal_L12_N
DUF5024
Motif
Other DBs
NCBI-GeneID:
130069440
NCBI-ProteinID:
XP_056089291
LinkDB
All DBs
Position
Unknown
AA seq
1265 aa
AA seq
DB search
MADPLRRTILAKLRGKKPKGKDANRAREGKEKVSQTQSDRDYYLSREMRTGPGSREPDSH
RTRGPAPGVSDPAEPKRFHTIGDSIGFGSCDTKPQTEALKPTDGHDQTRKQTHVTLREEK
SGEISTTGDPKTSDVFDYIEGNIQESDLIQVLESALEYRGDFRIQSPTFFPTELEIAVAP
GAPRHHSVDSEDDDYYDNQILPFYEPYVQNHANERDVVEKISNQTALETNRLKSQLKEAY
YLLLNISFDGPVEDNGFVEEDSSSSSVSSGLSSGRFFTVLGLTESRSLENILKTGSEPVL
QRSVSDSRVTYSLLSADPPVESVHELVSANPTGVLTTTPGARRSRDGPAHKHPGVTVNKM
QEWMQKGRVLSTEMKHRIAGSSVRPKAAPMECVAGSSGVYPRDLFAPFNHITVSKKRNWL
QQSVLRPRLADDNDADDEGEIWYNPIPEDEEPHCVPAITVSHTGPVVDGDGAGERPTLAC
KTQEENLTVRATDPSEQSTGGLSPSSSPNPAKRSTAINWSFPDKIKSPRTVRKLSMKMKK
LPDLSRKLSVKGNPSNVSISNSQSEPRAHSPRANGIAELGQSRPRLSPSGVTTALASGNV
IWRYHLDSSVSTQHNFDKRRSNCGGIPKSASKGGYLSDGDSPELVAKSGKHGNSERKNCK
ARDPNGNGGSPKLPGTELDIDAFRSYSFSEQPKCLTFISGLMSLHFYGAEDLKPPRVDSR
NVYCAIQVDSVNKARTALLTCRTAFLDMDHTFNIELENAQHLKLVVFSWESTPRRNRVCC
HGSVILPALFRVSKTHQLVVRLEPRGMIYVKLSLMEQRQNSLDGPEGGHETQVFGVEARR
VVEREASGLMVPLLIEKCISEIERRGCQVVGLYRLCGSAAVKKELREAFERDSHSVELSE
NNYPDINVITGVLKDFLRELPRPLITQPLYESVLESMSKRPLLMGTGVCENDPLDTDHAV
SLMEILPDVEKATLRKLLDHLKRVASHHEVNKMTCQNLAVCFGPVLLSQRQEASCHGNRV
FIDSEELASALHFKKHIEVLHYLLQLWPVVDAQGKSSSPVPALMESLPVVTAAVRRRKER
PQVLNLTEADMAGVLRPRPGRLDSPSNRYAGDWSRCRETYLQPSCLEEADYDDVPSEEPL
NVGQEDLPKGTEDVVPEQEFPEVDEAMERVEEMQIEEELSEEEDTRELDRLQVEEPLPIS
PCDQILPDYEEHRPKEHTYQAYMKIQEISPVLSNRVNLRDLQESIDTLIGNLERELNKNK
LNVGY
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcctctgcggaggacaattctagccaaactcaggggcaagaaacccaaaggg
aaagacgcgaaccgggcgagagaaggtaaagaaaaagtttctcaaacgcagtcagacaga
gattattatttatcacgtgagatgagaaccggaccggggtcgcgagaaccggactcgcac
cggaccaggggcccagctcccggggtctcggatccagccgaaccgaagcgctttcacacg
atcggagactcgataggcttcggcagttgcgatacaaaaccccaaacagaggcattaaaa
ccaacagatggtcacgatcaaacgcgtaaacaaacacatgttacattacgcgaggaaaag
tccggggaaatcagtaccacgggcgacccaaaaaccagcgatgtgtttgattatatagag
ggaaatatccaggaaagcgatttaatccaggttttagagagtgcgttggaatatcgcgga
gattttaggattcaaagcccgacttttttccccaccgagctggaaatagccgtggccccc
ggggcccctcgacaccactcggtcgacagcgaggacgacgattattatgataaccaaatt
ctgcccttttacgaaccatacgttcaaaatcacgcgaacgagcgagacgtagttgagaaa
atatcgaaccaaaccgcgctggagacgaacagactgaagtcgcagttaaaagaagcgtat
tatctgctcctaaacatcagcttcgatggtccggttgaagataatgggttcgtggaggag
gacagcagttcgagtagcgttagctcgggtttatctagcggccgcttctttacggttctc
ggtttaacggagagcagaagtttggagaatatcctgaaaaccgggagtgaaccggttctc
cagcgctcggtgagcgatagccgggtcacgtactcgttactaagcgcggatcctccggtt
gaatcggttcacgaactggtttccgcgaaccctacgggagtcctcacgacaacaccgggt
gcgcgccggtcccgcgacggtcccgcgcacaaacacccgggagtgaccgtgaacaagatg
caggagtggatgcagaaagggcgcgtgctctcgaccgagatgaagcaccggatcgcggga
tcctccgtgaggccgaaagcagcaccgatggagtgtgtcgccgggtcgtcaggtgtgtat
ccgcgagaccttttcgcaccgttcaaccacatcaccgtctccaaaaagcgcaactggctc
cagcagagcgttctcaggccccggctagccgacgacaacgacgccgacgacgagggcgag
atttggtacaaccccattcctgaggacgaggagccccactgcgttcccgccatcacggtg
tctcacacgggtcctgtggtcgacggcgacggagccggcgaaagaccgacactcgcgtgc
aaaacgcaggaggagaacctcaccgtcagagcgacagatccttcagagcaatccactggt
ggactttctccttcttctagcccaaacccagctaaaaggagcacagctatcaactggtct
tttcccgataaaatcaagtcaccacggactgtccggaaactttctatgaagatgaagaaa
ctgcctgatcttagtcggaagcttagcgttaaagggaaccctagcaatgtgtccatcagc
aacagccaatcagaaccaagggctcactcacctagagccaatgggattgcagaactgggc
cagtcccggcccagactgtctccgtcgggtgttacgactgcattggcgagtggtaatgtg
atttggcggtaccatcttgacagcagtgtttctactcagcacaactttgataaaagaagg
agcaactgtggcggcattcccaaatcggcaagtaagggaggttatctaagtgacggagac
tcgcctgaacttgtggccaagtcgggaaaacacgggaactctgaaagaaaaaactgtaaa
gcccgagatcccaatgggaatggcggaagtccgaagctccccggcacagagttggatatc
gatgccttccgatcgtacagtttctccgagcagccgaagtgcctaacgttcatctcggga
ctaatgagtttgcacttctatggggcagaggacttgaagccaccgcgggtcgattcccgc
aatgtttactgtgccattcaggtggactctgtcaataaagctcgtacggctttgcttacc
tgtcgcacggcctttctagacatggaccacacctttaacattgagttggagaacgctcag
cacctcaaacttgtggtcttcagttgggaatcaacgccacgacggaaccgggtgtgctgc
catggatccgtgattctcccggcgttgtttcgcgtgagtaagacacaccagcttgtggtc
cgtctggaaccgcgtgggatgatctacgtaaagctgagtctcatggagcagaggcagaac
tcactcgatggcccggaggggggtcacgaaacgcaggttttcggcgtagaggctcggcgc
gtggtggaacgggaagcttctggattaatggttccactgcttatcgagaaatgcatctct
gagatcgagaggaggggttgtcaggtggtgggtctgtatcgtctctgtggttcggctgcg
gtgaagaaggagcttcgggaagcgttcgagagggacagtcacagcgtcgagctctcggaa
aacaactacccggatatcaacgtcatcacaggcgtgctgaaggatttcctgcgagagctc
cctcgtcctctgatcactcagccgctgtacgagtcggttctggagtcgatgtcgaagcgg
ccgctgctgatgggaaccggcgtgtgtgagaacgacccgctcgacacggatcacgccgtc
agcctgatggagatcctgcccgacgtcgagaaggcgaccctgcgtaagctcctggatcac
ctgaagcgcgtggcgtctcatcacgaggtgaataagatgacctgccagaacctggcggtg
tgtttcgggccggttctgctcagccagcggcaggaggcgtcgtgtcacgggaaccgggtc
ttcatcgactccgaggagctggccagcgctctgcacttcaagaagcacatcgaggtgctg
cactatctgctccagctctggcccgttgtggacgcacagggtaaatcttcatctccggtt
cctgccctgatggagtcgctcccagtggtgacggctgccgtaaggaggagaaaagagcgt
ccacaggtgttgaatttaactgaggcggacatggctggagttttgcgacccagacctgga
cgtctggacagtcccagtaaccgctacgccggggactggagccgatgccgggaaacttac
ctccaaccgagctgcctggaggaggccgactatgacgacgttcccagcgaagagcctctg
aacgtgggacaggaggatttaccgaagggtactgaagatgtggtccctgaacaagagttt
cccgaggtggatgaggcaatggagagggttgaggaaatgcagatagaggaggaattgagt
gaggaagaggatacacgagagttggataggctacaagtagaggaacctctacctatcagc
ccctgcgatcagatcctccccgattacgaggagcacagacccaaagagcacacctaccag
gcctacatgaagatccaggagatcagcccagtactaagcaacagggtcaacctacgggac
ttgcaggagagcatcgacacgctcattggcaacctggagagggagctcaacaagaacaag
ctcaacgtaggttattga
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