Rhinichthys klamathensis goyatoka (western speckled dace): 130069512
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Entry
130069512 CDS
T09701
Symbol
smarca2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130069512 (smarca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rkg03021
]
130069512 (smarca2)
03036 Chromosome and associated proteins [BR:
rkg03036
]
130069512 (smarca2)
Transcription machinery [BR:
rkg03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
130069512 (smarca2)
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
130069512 (smarca2)
Chromatin remodeling factors
BAF complex
130069512 (smarca2)
PBAF complex
130069512 (smarca2)
GBAF(ncBAF) complex
130069512 (smarca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
130069512
NCBI-ProteinID:
XP_056089383
LinkDB
All DBs
Position
Unknown
AA seq
1569 aa
AA seq
DB search
MSTTNEPPVGMSHAGPSPGAGLSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVPHAIQG
QGAGEYSQDMQPMHKPMEGMHEKGMGDDMHYGQMKGVGMRSLHSGMGPPQSPMDQHSQGY
MSPHPSPLGQVPEHVPSPMSGGGPNPPQMSQGQSPMMPMDPQGMGQQARGQSAFSPIQLQ
QLRAQILAYKILGRGQPLPENLQLAVQGKRSLPTMQQQPVNTGPYNRPPGMPMTHGGPAT
GPCPSPSMQTLTQSSGPKPWPEGQGAETPSTPQKLAVPAPSGRPSPAPPLAPTGAQPVPS
TSLTSQPQPQPPSGPGQPSLIIQLQQKQNRITPIQKPQGLDPVELLQEREYRLQARIAHR
IQELENLPGSLPPDLRTKATVELKALRLLNFQRQLRLDVVACMRRDTTLETALNSKAYKR
SKRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSISGKNQKLS
KAIATWHTNTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYV
ANLTELVYEHKAAQAAKEKKRKRKKKKKEAGEAEGMGAIGPDGEPIDENSQMSELPVKVI
QTETGKVLQGTDAPKSSQLEAWLEMNPGYEVAPRSDSEESGSEFEEEDDEEVVSRAESEE
KKVIDPNSDEVSERAAKHIIDSAKQDVDDEYSVQAGETSSQSYYGVAHAVIERVDKQSTL
LINGTLKHYQIQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMENKRLNGPYLI
IVPLSTLSNWVYELDKWAPSIVKISYKGTPSMRRSFVPQLRSGKFNVLITTYEYIIKDKH
ILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFL
LPTIFKSCTTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQL
PEKVEYVIKCDMSAIQKVLYRHMQGKGILLTDGSEKDKKGKGGAKTLMNTIMQLKKICNH
PYMFQHIEESFAEHLGYPNGIISGPDLYRASGKFELLDRILPKLKATNHRVLLFCQMTTL
MTIMEDYFSYRNFLYLRLDGTTKSEDRAELLKKFNSEGSQYFIFLLSTRAGGLGLNLQAA
DTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKV
IQAGMFDQKSSSHERRAFLQAILEHEEQNEEEDEVPDDETLNQMIARNEDEFELFMRMDL
DRRREDARNPKRKPRLMEEDELPSWILKDDAEVERLTCEEEEEKIFGRGSRHRRDVDYSD
ALTEKQWLRAIEDGNLEEIEEEIRLKRRKRRRHVDKDMRREDGDKAKKRRGRPPAEKLSP
NHPKLTKQMNAIVDTVINYRDASGRQLSEVFVQLPSRKELPEYYELIRKPVDFKKIKERV
RCHKYRSVSDLEKDVMLLCHNAQTYNLEGSQIYEDSIVLQSVFKSARQKIAREESDDDSN
DDDDDEEDSEEESKSVKVKIKLSKRDERCQDKGKKRPSRGKAKPVVSDDDSEDEQEENEQ
SEGSQSDDE
NT seq
4710 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccaccaatgagccaccagttgggatgtcccatgctggcccctcaccaggtgct
ggcctgtctccggggcccatcctagggcccagccctggacccggcccctctcctggctct
gtacacagcatgatgggcccaagccctgggcccccaagcgtcccgcatgctatacagggc
caaggggctggagagtactcacaggacatgcaaccaatgcataagccaatggagggaatg
catgagaaggggatgggagacgatatgcactatggccagatgaagggggtgggcatgaga
tccctgcacagtggcatgggtcctccacagagccctatggatcaacacagtcaaggatac
atgtcccctcatccctcgccattgggccaggtgccggagcatgtgcctagccctatgtca
ggaggagggccgaacccgccgcaaatgtctcagggtcagtcgcccatgatgcccatggat
ccgcaggggatgggacagcaggcgaggggtcagtctgccttcagcccaatccagctacag
caactcagggctcagatcctggcttacaagatcctgggccgtggtcagcctctgcctgaa
aatctgcagttagctgtgcagggcaagaggagcctccccaccatgcagcagcagcccgtc
aatactggcccctacaacagacctccaggtatgccaatgactcatggagggcctgcgact
ggcccgtgtccctctccatccatgcagactcttacccagagctctgggccaaaaccgtgg
cctgaaggtcaaggtgcagagacccccagcactccacagaagctggcggtcccagcgccc
agcggcagaccctctccagctcccccgctggcccccaccggtgcacaacctgtgcccagc
acctctctcacctcccaaccccaacctcagccaccgtctggaccaggccagccctctctc
atcatccagctccagcagaaacagaatcgcatcaccccgattcagaagcctcagggtctg
gaccctgttgaactcttgcaagagagggaataccgacttcaggccaggattgctcacaga
attcaggagctggagaatcttccggggtcgctgccgcctgatctgaggacgaaagcaacc
gtggagctgaaggccttaagactgctcaacttccagcggcagctgaggctagatgttgta
gcctgcatgcgccgagacacaactctggagactgccctgaactccaaggcctacaagcgc
agcaagagacagaccctgagagaagctcgcatgactgagaaactagagaagcagcagaaa
atcgagcaggagaggaagcgccgacagaaacaccaggagtatctcaacagcattctgcag
catgcaaaagatttcaaggaatatcacaggtccatctctggaaaaaatcaaaagctgtcc
aaagccattgctacctggcacactaacacagagagagagcagaagaaggagactgaaaga
atcgagaaagagaggatgaggagactgatggcggaggatgaagaaggttacaggaagcta
attgaccagaagaaggacaagcgtcttgcctaccttcttcaacagacagatgaatatgtg
gccaacctgactgagcttgtctatgagcacaaggctgctcaggctgcaaaggagaagaag
aggaagagaaagaagaaaaagaaggaagctggtgaggccgaaggaatgggagccatcggg
cctgatggagagcccatagatgagaacagccagatgagcgagctgccagtcaaagtcatt
cagacagagactgggaaagtgctgcaggggacagatgcccccaagtccagtcagttagag
gcttggctcgagatgaaccctggctatgaagttgctccccggtcagacagtgaagagagt
ggctcggaatttgaagaggaggatgatgaagaggtggtctccagagccgaatccgaagaa
aagaaagtcatcgatcccaacagtgatgaagtatctgaaagagcagccaagcacatcata
gattctgctaagcaggatgtggatgacgagtacagtgttcaggcgggagagaccagctcc
cagtcttactatggagtggcccatgcagtcatagagagggtggacaaacagtccaccctt
ctgatcaatgggaccctcaaacattaccagatccagggtctggaatggatggtgtctctg
tacaacaacaacctgaatggtattctggccgatgagatgggtctggggaagaccattcaa
actatcgcccttatcacctatctgatggaaaacaagaggctcaatgggccgtacctcatc
atcgtaccgctctcgactttgtctaactgggtttatgagttggacaagtgggcaccaagt
attgtgaaaatttcctacaagggcacaccatcaatgcggaggtcttttgtgccgcagctc
cgcagtgggaagtttaatgtccttataaccacctacgagtacatcattaaagacaagcac
attctcgccaagattcgctggaagtatatgattgtggacgagggtcaccgcatgaaaaac
catcactgcaagctcacgcaggtgttgaacacccactacgtcgctcccagaaggctgttg
ctcactgggacccctctacagaacaaattacctgagctctgggccctgctcaacttcctg
ttgcccaccatcttcaaaagctgcaccacctttgagcagtggttcaatgctccatttgca
atgactggagagagggtggatctaaatgaagaggagaccatcctcatcattcgccgtttg
cataaggtattacgtcccttccttctgcgcagactgaagaaagaagtggagtcccagtta
cctgagaaggtggagtatgtcatcaaatgtgacatgtcagccatccagaaggttctgtac
aggcacatgcagggcaaaggtatcctgctcactgacggctcagagaaagacaagaagggt
aaaggaggagccaagactttaatgaacaccatcatgcagctgaagaagatctgtaaccat
ccctacatgtttcagcacattgaggaatccttcgctgaacacttgggatatccaaatggc
attatcagcggccctgacctgtaccgtgcctctggcaagtttgagttactggaccgcatc
ctgcccaagctgaaggccaccaatcacagagtgcttctgttctgtcagatgaccaccctc
atgaccatcatggaggattattttagctaccgtaacttcctctatttgcgtctggatgga
actacaaagtctgaggaccgggcagagcttttaaagaaattcaacagtgaaggctcccag
tattttatcttcctgttgagcaccagggcaggtggtttgggcctcaacttgcaagctgca
gacaccgttgtgatctttgacagcgactggaacccccaccaggacttgcaggcacaggac
cgagcccaccgcatcggccagcagaatgaagtacgcgtactgcgtctgtgcactgttaac
agtgtggaggagaagattctagcagcggccaaatataaactgaacgttgatcagaaggtc
attcaggcaggcatgtttgatcagaagtcctctagccatgaacgtagagccttcctgcag
gctattctggagcacgaggaacagaatgaggaggaagatgaagttccagatgatgaaact
ctcaatcaaatgattgctcgtaatgaggacgaatttgagcttttcatgcgcatggatttg
gaccgccgtcgagaggatgcgcgcaaccctaagcgtaaacctcggctaatggaagaggat
gagctgccatcatggatcctgaaggatgatgcagaggtggagcggctgacctgtgaggag
gaggaggaaaagattttcggccggggatctcgtcaccgcagagatgtcgactacagtgac
gcattgacggagaagcagtggctaagggctatagaggatggcaacctggaggaaatcgag
gaggaaatacgactgaagaggcgcaagcgtaggagacatgtggacaaagacatgaggcgt
gaggacggagacaaggccaagaaaaggagaggacgccctccagcagagaagctctcccca
aaccatcccaaactcacaaaacagatgaatgctattgtcgatactgtcatcaattacaga
gacgcatcaggccgtcagctcagcgaggtctttgtgcagttgccctccaggaaagagctc
cctgaatactatgaactgataaggaagccagtggacttcaagaagatcaaggagcgtgtg
cgctgccacaagtacagaagtgtgagcgatctggagaaagatgtcatgcttctttgtcac
aatgctcagacttacaatctagagggctcacagatctatgaggactccattgttctccag
tcagtattcaagagtgccagacaaaagattgccagggaggagagtgatgatgacagcaat
gatgatgacgatgatgaggaagattcagaggaagagtctaagtcagtgaaggtgaaaatt
aagctgagtaaacgggacgagagatgtcaggacaaaggcaagaagagaccgagtcgtgga
aaggctaagcctgtggtcagtgacgatgacagcgaggacgaacaagaggagaacgagcag
tcagaggggagccaaagcgacgatgagtga
DBGET
integrated database retrieval system
