Rhinichthys klamathensis goyatoka (western speckled dace): 130069538
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Entry
130069538 CDS
T09701
Symbol
ngs
Name
(RefSeq) notochord granular surface isoform X1
KO
K07610
desmin
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130069538 (ngs)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rkg04812
]
130069538 (ngs)
Cytoskeleton proteins [BR:
rkg04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
130069538 (ngs)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
Filament_head
DUF848
Fib_alpha
DUF3450
DUF1664
Lipoprotein_20
Motif
Other DBs
NCBI-GeneID:
130069538
NCBI-ProteinID:
XP_056089421
LinkDB
All DBs
Position
Unknown
AA seq
519 aa
AA seq
DB search
MSYSPERMSSYRRHFEGGLTSSSTLQVRVSSPSPTRGPARHRSASYNRSGTLGRRTLSGS
RRSRMTSSVSMGTLCLGMGWGVAGGAVDLDAAAAENQAFLSTRTGERKEMVALNDRLAVY
IEKVRSLEQSNKLLEAEIDAIKGHYVKPSGLRLLYEEQLRELRRIADQMKVQRDLAVAAK
DAMAGQLEMLKVKYEEALEARKKAELEIEAFRPDVDAATSARIALEKRLENLEVELEFLQ
RIHKKEIEELMAQIYGSVAKVDVAFSLPDLATALKQIQAQYDSIAAQNLQEMDAWYKAKF
QDLNNATSRHMETARSVREEITAYKKEIQNKLRELEVLKNRNEALLLQIKEAQEKYKREE
EELQIRIKTLKEELKSIKGKIALLLREYQDLLNVKMSLEIEITTYRKLIEGEDSRLSSMV
SSLSLMSASAAMVSSVSGASSQGVSGAVSSSASEKMLSSSSIVNHNHHESVEEFSHEQAV
EMTERKTVLIRTVKTDEDMIQRDTQERTITISGAADEND
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgagttacagcccagaaaggatgtcatcttaccgccgtcactttgagggtggcctgacc
tcgtcttccacgctccaggtccgggtgtccagcccttcgcccacccgtgggcccgcgcgc
caccgctccgccagttacaaccggagcggcactttggggcgcaggacgctctccggatcc
cgcagatcacgcatgaccagcagtgttagtatgggaacgctgtgtctgggcatgggttgg
ggggttgcaggaggtgctgtggatctggacgctgccgctgctgagaaccaggctttcctc
agcacacgcacaggtgagagaaaggagatggttgccctgaacgaccgcttggctgtatac
atcgaaaaggttcgttctctggagcagagcaacaagctgctggaggcagaaattgatgcc
atcaagggtcactatgtgaagccgtccggcctgagactgctctatgaggagcagctgagg
gagctgaggaggattgcagaccagatgaaagtccagcgggacctggcggtagcagcaaag
gatgccatggcaggtcagctggaaatgctgaaggtcaaatacgaggaggctcttgaggcc
agaaagaaggcggagcttgagatcgaggccttcagaccggatgtggatgcagccacgtct
gcccgaattgccttggaaaaacgactggaaaacctagaagtggagctcgagttcctacag
aggattcacaaaaaggaaatcgaggagttgatggctcagatttatggatcggtggctaag
gtagatgtggccttctctttgcccgatctggccaccgctctcaaacagatccaggctcaa
tatgacagcatcgccgcacaaaacctgcaggagatggacgcctggtacaaagcgaagttc
caagatctaaacaatgcaacatcacggcacatggaaacagcaaggagcgtcagagaagaa
atcacagcttataagaaagagattcaaaataaactgagagaactggaggttcttaaaaac
aggaatgaagcactgctgctccagatcaaagaagcccaggagaaatacaagagagaggag
gaggagctacagatccgtataaagactttgaaggaggaactgaagtctattaaggggaag
attgcgcttctgctgagagaatatcaggatctgctcaatgttaagatgtcgctggagatt
gaaatcaccacatacaggaagctgatagagggagaagacagtcgcttatccagcatggtg
agcagtctgtctctcatgagcgcgagcgcagcaatggtcagcagcgtttccggggcaagc
agtcaaggggtcagtggagcggtgagctcatccgcctcagagaagatgctctccagcagc
tcaatagtcaaccacaaccatcacgagtccgtggaggagttcagccatgaacaggctgtg
gagatgacggagaggaaaacggtcctcattagaacagttaagacagatgaggacatgatt
caaagggacacacaagagcgcacgatcaccatctctggcgccgcagatgagaacgattga
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