Rhinichthys klamathensis goyatoka (western speckled dace): 130069785
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Entry
130069785 CDS
T09701
Symbol
grin3a
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3A
KO
K05213
glutamate receptor ionotropic, NMDA 3A
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04020
Calcium signaling pathway
rkg04080
Neuroactive ligand-receptor interaction
rkg04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
130069785 (grin3a)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130069785 (grin3a)
04082 Neuroactive ligand signaling
130069785 (grin3a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rkg04040
]
130069785 (grin3a)
Ion channels [BR:
rkg04040
]
Ligand-gated channels
Glutamate (ionotropic)
130069785 (grin3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
130069785
NCBI-ProteinID:
XP_056089874
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All DBs
Position
Unknown
AA seq
1118 aa
AA seq
DB search
MPGSWFGGALGRLVWLSLLAPSALIMILVPPASMAHPQPFQILKRIGHTVRVGALHLHPR
VIRQDHLSGRDADWDADRETREEWDMVIQSVHEQAWRGIRTKSSANNPNKASKSKTALKQ
VGTDAVFLPRDSVLLATETLNRVVGLLPYNLTLEIVMAVEAGLGELPAFSFSSSSTSASG
DPVSFLQSVCHTVIVQGVSAIIAFPQNRDELVKLEFISSTLQIPVISVVQKVFKRQSQNP
LHFQMAMRNPQTPQADLIFSLLSMNTWYDVSLVMCQQMNISDFVFLLHNSSKFHLGTVLK
ISTNSSSKSDFQTSLQGQLESIKDSTSTIVTFGCDIRDIRRIFTTIAKFGLILPDYRWII
GDSQNVEELRTEGLPLGLLAHGRMGEPSLDHYVQDALELVARAVGSAATVSPELALIPGI
TNCMARLETKNLTSGTFLSRYMANTLFDGLSGYISVQEESAIVSESHHFIWNLQHDPIGK
PMWTRLGNWKQGKVVMDYGVWPNKRQSQPGGDWRHSSRLHLRVVTLVEHPFVFTRDVDEE
GLCPAGQLCLDPQTNDTALLESLFQGLQSANDTVPMEFKKCCYGYCIDLLEKLAEDMGFK
FDLYIVGDGKYGAYKSGRWSGLVGDLMSGAAHLAVTSFSINSARSQVIDFTSPFFSTSLG
ILVRTMDTAAPIGAFMWPLHWSMWLGIFVSLHLTAVFLTLYEWKSPFGMTPRGRNRERVF
SFSSALNVCYSILFGRTAAIKPPKCWTGRFLMNLWAIFCLFCLSTYTANLAAVMVGEKTY
EQLSGIHDPKLHHPSQGFRFGTVRESSAEDYVKKSFPEMHEYMRRYNVPTTPDGIDHLKD
DPQKLDAFIMDKALLDYEVSIDADCKMLTVGKPFAIEGYGIGLKQNSPLTSNISELVSQY
KSDGFMDTLHDKWYKVVPCGKRSFAVTETLQMGIKHFSGLFVMLCIGVALSLLTTLGEHI
VHRWLIPRIPESSQFKYWLHTSQRLHRAINPTFKEDKLQTVAKPEKSCNVGNNQQMPWNS
LGTSNCNRQKLSNQDGQQNDLECSHCKELLSPQEKRQLPLQATSNGKTDLLGLAQNPIVQ
ELTELETQIQLIKKQLQLAMKKKKDLEQYQKTETSTES
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgccgggctcttggtttgggggtgcgctgggcaggttggtgtggctctccttacttgcg
ccgagcgcattgataatgatccttgttcctccagcatctatggcgcatccacaaccattt
cagattctgaagaggatcggacacacggtgagagtcggagctttgcacctgcatcctcga
gtaatcaggcaggatcatctcagcgggagagacgcggactgggatgcagacagggaaacg
cgggaagagtgggacatggtcatccaaagtgtgcacgaacaagcatggaggggtattagg
actaaaagctcagcgaataaccccaacaaggcctccaaaagtaaaaccgcactcaaacaa
gtgggtacggatgctgtgtttctacctcgagactctgttctactcgctacagagactctc
aatcgagtggtggggcttttaccctacaacctcacccttgagatagtcatggctgtggaa
gcaggacttggggaactacctgctttctccttctcctcgtcgtctacatctgccagtggc
gatcccgtgtcgttcctgcaaagtgtttgccacactgtcatcgtgcaaggagtttctgcc
atcatcgcgtttccacaaaacagggacgaactggtgaagttggaatttatttcctcaacg
ctacagattccagtcatcagcgtcgtccagaaggtattcaaacgccagagtcagaaccca
ctccatttccagatggccatgcgaaatcctcaaacccctcaagcagatctcatcttctcc
ctgctgtccatgaatacgtggtatgatgtcagtctggtgatgtgtcaacagatgaacatt
tcagactttgtcttcttgctccataacagctccaaatttcatctgggcacagttctcaaa
atatccaccaacagcagctccaaaagtgactttcaaacgtcccttcaaggccaactggag
tccatcaaagactcaacatctactatagtgacctttggatgtgacatcagggatatacgg
agaatctttaccaccattgcaaagtttggactgatccttcctgattaccgctggattata
ggagactctcaaaacgtggaggaattacggacagaggggctaccgttgggtcttcttgca
catggtcgtatgggtgagccctcactggatcattatgtccaggatgccttggagctggtg
gcgcgggcggtgggatcagctgccactgtgtctccagagctggcactgattcctggcatc
acaaactgtatggcaagacttgagactaaaaatctcacatcaggaacctttctgtccaga
tacatggccaacacgttgtttgacggcctgagcggctacatcagtgttcaagaggaatct
gccatcgtctctgaaagccatcacttcatatggaatctacagcatgacccaataggcaag
cccatgtggacgcgtctcggcaactggaagcaaggcaaagtggttatggattacggtgtt
tggcctaacaagagacagtctcagccagggggagactggcggcattcctcacgtctgcac
ttgcgagtcgtcaccctggtagaacacccgtttgtcttcacccgagatgttgatgaagaa
ggtttgtgcccggctggccagctgtgccttgacccccaaacaaacgacacagccttgctg
gaaagtctttttcagggtttgcaaagtgccaatgacaccgtgcccatggagtttaaaaaa
tgttgctatggctattgcatcgatcttttagagaagctggcagaggacatggggtttaag
tttgacctctacattgtgggagatgggaaatacggagcttacaagagcggtcgctggtca
gggctggtcggggacctcatgagcggggctgcgcatctggctgtcacttccttcagcatc
aactcggcacgcagccaggtcattgacttcaccagcccgttcttctccaccagcctggga
atccttgtcaggactatggatactgccgcacccatcggcgccttcatgtggcctctgcac
tggagtatgtggctgggaatatttgtgtctttacatctgacggccgtgttcctgaccttg
tacgagtggaaaagccctttcgggatgaccccaagggggaggaacagggagcgtgtcttt
tctttctcctctgcgctaaacgtttgctactcaatcttattcggcaggactgccgccatt
aagccgccaaagtgttggaccggcagattcctcatgaacctctgggccattttctgtttg
ttctgcctgtcaacgtacacagctaatctcgccgctgtaatggttggtgagaaaacctac
gagcaactctcaggtatacatgatcccaagctccaccatccatctcaaggtttccgcttt
ggaactgttcgggagagcagcgctgaggactatgtgaaaaaaagctttccagagatgcat
gaatacatgagacgatacaatgtccctacaacccctgacggaatagatcatcttaaggat
gatccccaaaagctggatgcttttataatggacaaagctcttttagactatgaagtgtct
attgatgcagactgcaaaatgctgacagttggaaagccatttgcaattgaaggctatggc
attgggctcaaacagaactctcctctgacttcaaatatctctgagttggtcagtcagtac
aaatctgatggatttatggacacgctgcatgataagtggtacaaggtggtaccctgtggt
aaaagaagctttgcagtcacagagactttacagatggggataaagcacttctcagggtta
tttgtcatgctatgcatcggagtggccctgtctctcctcaccacactaggtgaacacatc
gtccatcgctggctgatacccagaataccggagtcgtcacagtttaagtactggctccac
accagtcaaagattacatcgagcaattaacccgactttcaaagaagacaaattacagact
gttgcaaaaccggagaaaagctgcaatgttggaaacaaccaacaaatgccatggaactct
ttgggaacttccaactgcaacaggcaaaaactgtccaatcaagatggacaacaaaatgac
ctggaatgttcacactgtaaagaactgctgtccccacaggagaagagacagcttccatta
caggccacatctaacggaaaaaccgacttgctgggcctagcccagaacccaatagtacag
gaattgacagaactggaaacacaaatccagcttatcaaaaagcaactgcagcttgccatg
aagaagaaaaaagatctggagcagtatcagaagacagagacttcgaccgagtcctag
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