Rhinichthys klamathensis goyatoka (western speckled dace): 130069792
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Entry
130069792 CDS
T09701
Symbol
zgc:91944
Name
(RefSeq) homeobox-containing protein 1 isoform X1
KO
K24885
homeobox-containing protein 1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130069792 (zgc:91944)
Transcription factors [BR:
rkg03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
130069792 (zgc:91944)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
AbiJ_NTD3
HlyD_D4
Motif
Other DBs
NCBI-GeneID:
130069792
NCBI-ProteinID:
XP_056089887
LinkDB
All DBs
Position
Unknown
AA seq
470 aa
AA seq
DB search
MRQWCLPAVAPRAEPLPTGRLSPQISDVRMECCDVEPRYTIEQIDLLQRLRLSGMTKPQI
IQALESLERLDPDHRVPCCNNHSAPPSAPTSAAPAAPSSSSSSSSSLTSATTQTPVIDAA
LSPSNSYDASPPPLYPPSGVQRSFSYDLAEEDWDLEEKVEEYMRRDSNLVKEEIKAFLNN
RRISQAIVGQVTGISQSYISQWLLQQGLEMSDSKRRAFYRWYLLERNSPGIRWSENQHAQ
VPRSRTDTPWNRQRELLMHLLPWYSAHQAQSGTTLSMRSLVKEEPDWRLAASPADRAAVG
PFRLRRGSRFTWRKECQSIMESFFIENQYPDEAKREEIANACNAVIQKPGCKLSEFERVT
ALKVYNWFANRRKEMKRRANIEAAILESHGIEVPSPSCHSNSEEIETQEFGDQVMSQRFS
EQVEDLSQRKDIEPEGAMLPPVDVVSLPSPASQLMERKLDESKREAIDDD
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgcgacagtggtgccttcctgctgtggctccacgcgcagaaccgctcccaacgggccga
ttatcacctcaaatatcagatgtcaggatggagtgttgtgatgtggagccgcgctatacc
attgaacagatcgacctgctccagcgtttaaggctgtcagggatgaccaaacctcagatc
attcaagcccttgagtctttagagaggcttgatccagaccatcgtgtcccatgctgcaac
aatcactcggccccacccagcgcccctacctccgcagcccctgctgccccctcgtcctcc
tcctcttcctcctcctctcttacctcagccaccacacagacccctgttatagatgctgca
ttatcacccagcaacagctacgatgcctcgcctccacccctgtacccacccagcggagtt
cagaggtcgtttagttacgacttggcagaagaggactgggatctggaggagaaggtggag
gaatacatgaggagagacagtaaccttgtgaaagaagagataaaagcttttctcaataac
agaaggatctcacaggcaattgttggacaagtcacaggtatcagtcagagctacatctcc
cagtggcttctgcagcaggggcttgagatgagcgactccaaacgcagggcgttctatcgc
tggtatctgctggagcgtaacagccctggaatcagatggagtgaaaaccagcatgctcag
gtccccaggagcaggactgacactccctggaataggcagagagaactgctgatgcacctc
ctcccctggtactctgctcaccaagcccagtcaggcaccacattgtccatgcgttccctg
gttaaagaggagcccgactggaggttggctgcaagccccgcagacagggcagcagttggg
ccttttagactgcgcagaggaagtcgcttcacctggagaaaagagtgccagtcaatcatg
gagagtttctttatagagaatcagtatcctgatgaggccaaaagagaggaaattgccaat
gcctgtaatgctgtcattcaaaaacctggatgcaaactgtcagaatttgaacgagtcact
gcgctcaaagtgtacaactggtttgccaatcggaggaaggagatgaagagacgtgccaac
atagaggctgccatactagagagccatgggatagaggtgccgagccccagctgccactcc
aacagcgaagagatagagactcaggagttcggagatcaagtcatgagtcagcgtttctct
gagcaggttgaggatctctcccagagaaaagacattgagccagaaggtgccatgctacct
cctgtggatgtggtgtctcttccaagcccggcctctcaactcatggagcggaaactggat
gaatctaaaagagaggccattgatgacgattaa
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