Rhinichthys klamathensis goyatoka (western speckled dace): 130069831
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Entry
130069831 CDS
T09701
Symbol
podn
Name
(RefSeq) podocan
KO
K25037
podocan
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
rkg00535
]
130069831 (podn)
Proteoglycans [BR:
rkg00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class V
130069831 (podn)
BRITE hierarchy
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_9
LRR_6
LRRNT
Motif
Other DBs
NCBI-GeneID:
130069831
NCBI-ProteinID:
XP_056089940
LinkDB
All DBs
Position
Unknown
AA seq
592 aa
AA seq
DB search
MDQRRGLLELLCLVLLGWTLLRAQAEPDGDPDDAHGRVENVEQKMSCPENCSCTEEGAVD
CSGASLNEFPRHELLSEQTRQLSLQNNQITEVTLEHLSRLQLLETLNLQNNRLTTQGLDE
EGFHTLEKLSYLYLANNKLTAAPRHLPPSLVSADFAANQLTKIYPDTFGLKPALKSVYLH
NNKLTDAGLPENMFNGSDNLEILIMSSNFLRYVPKSLPTALYRLHLKNNKLEKIPAGAFD
NLSHLRELYLQNNFLSNDGVDNETFSHLNSMEYLDLSNNNLTMVPLGLPRNIVLLHLEKN
YIQSIAVNALTPIRNLEYLLLHNNHLRSRSIHPSAFQGLKRLHTVHMYNNLLERVPRGLP
RRAKTLMLLHNHISEIGRNDLITLYTLTELNLSYNRLTSAKLHREAFRKLRILETLDLSG
NKLQALPLGLPKSLRILKVKDNQMTEVPEGALLGMSSLREIYLANNQLKLNSIYQGAWQE
LSALTTLDLSANMLSHVPPDLPESLEFLHLQNNRISSVSASAFLNTPNIKGIFLRFNRLS
VHSVSEESFSQLSKLQVLDIGHGNISPNRGRGGEEEEEEEDLPYDEEKEKHS
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggatcagcggcgcgggctgctggagctgctgtgtttggttctgctgggctggactctt
cttcgagctcaggcggaaccagacggagacccggacgacgcccacggaagagtggagaat
gtggagcaaaagatgtcctgtccggagaactgcagctgcaccgaggagggggcggtggac
tgtagcggagcgagtcttaatgaattcccacgacacgagttattatccgaacagacacgc
cagctctcgctgcagaataaccaaatcactgaggtcacgctggagcatctgtctcgactt
cagctgttggagacactaaacttacagaacaaccggctcacgacacaaggccttgacgag
gaaggttttcatactctggaaaagctgagttatttatacttggcaaataataagctcaca
gcagctcccagacacctccctccctctttggtcagcgctgacttcgctgcaaaccagctc
actaaaatctaccccgacacatttggcctgaagcctgctctgaagtcagtttatctccat
aacaacaagctaacggatgccggactgccagagaacatgtttaatggatcagacaacctc
gagatcctcattatgtccagtaatttccttcgttatgtccctaaaagtctgcccaccgcc
ctctaccgcctacacctgaagaacaacaagctggagaagattcccgcaggtgcattcgat
aatctgtctcatcttcgagaactttacctgcaaaacaacttcttgagtaatgatggcgtg
gacaacgagaccttcagtcacttgaacagtatggaatatctggatttgtccaataacaac
ttgaccatggttcctctcgggctgccccgcaatatcgtcctgcttcacctggagaagaat
tacatccagagcatcgcagtcaacgctctgacgcccatccgaaacttggagtacctgctc
ctccacaacaaccacctccgctctcgctccattcatccgtccgccttccagggcctcaaa
cgtctccacaccgtccacatgtacaacaacctcctcgagcgagttccccgcggccttcct
cgccgcgcaaaaaccctcatgcttctccacaaccacatcagcgagatcggacgcaacgat
ctgatcacgctttacacactcaccgagctcaacctcagttacaaccgcctcaccagtgcc
aagctccacagagaggccttcaggaagctcaggatcctggagacgctggatctgtcggga
aacaagctccaggcgctgccgttggggcttcccaagagcctccggattctgaaggtgaag
gacaaccagatgactgaggtgccagaaggagctctgctgggaatgagctcgctgagggag
atctacctggccaacaaccaactgaagctcaactccatctaccagggagcgtggcaggag
ctgagcgcactcacgacgctggatctctccgctaacatgttgtctcacgttcctcctgac
cttcccgagtctcttgagttcctccacctgcagaacaacaggatcagctcggtgtccgcc
tcagccttcctcaacacacccaacattaaagggatcttcctcagatttaaccgtctctca
gttcattcggtatccgaagagtctttttctcagctgtccaagcttcaggtgttggacatt
ggccacggtaacatctctcccaaccgaggccgaggaggagaagaggaggaagaggaggag
gacttaccgtatgatgaagagaaggagaaacattcatga
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