Rhinichthys klamathensis goyatoka (western speckled dace): 130069878
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Entry
130069878 CDS
T09701
Symbol
scfd1
Name
(RefSeq) sec1 family domain-containing protein 1
KO
K19998
sec1 family domain-containing protein 1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130069878 (scfd1)
Membrane trafficking [BR:
rkg04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
130069878 (scfd1)
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
130069878 (scfd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
ATP-synt_G
DUF3882
Motif
Other DBs
NCBI-GeneID:
130069878
NCBI-ProteinID:
XP_056090010
LinkDB
All DBs
Position
Unknown
AA seq
632 aa
AA seq
DB search
MAASIREKQTAALKRMLNFNAPPLKNTAAEPVWKVLIYDRFGQDIISPLLSVKELRDMGI
TLHLLLHSDRDPIPDVPAVFFVMPTEENVDRICQDLRNQLYESYYLNFISAISRSKLEDI
ASAALTANAVNQVTKVFDQYLNFITLEDDMFILCNQNKEQISYHAINKPDIMDTDMEGIM
DTIVDSLFCFFVTLGAVPIIRCPRGNAAEMVAVKLDKKLRENLRDARNSLFTGDTMGTGQ
FSFQRPLFVLADRNLDLATPLHHTWTYQALIHDVLDFHLNRVSVEESQGSEASPAGARPK
KKNKKSYDLTAADRFWQKHKGSPFPEVAEAVQEELDTYRAQEDEVKRLKSIMGLEGEDDG
AISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLDHIKSRKLDVYFEYEEKLMS
KSTLDKSLLDIISDPDAGTAEDKMRLFLIYYITSQQPPSEADLEQYKKAMVDASCDLSSL
NYIKQWKAFTKMAATPANYGSTGVKPMGLFSRVMNTGSQFVMEGVKNLVLKQHNLPVTRI
LDNLMEMKSNPETDDYRYFDPKMLRGSESSIPRNKNPFQEAIVFVVGGGNYIEYQNLVDY
TKAKQGKRVLYGCSELFNAAQFIKQLSQLGQK
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctccatccgggaaaaacagacagctgctctgaagcgaatgcttaacttcaat
gcgccacccctgaaaaacacagcagctgagccggtatggaaggtacttatttacgatcgc
tttggccaagacatcatatctcctctgctgtctgtgaaagagttacgagacatgggcatc
actctgcacctcttgttgcactcagatcgcgaccccattccagatgttcctgccgttttc
tttgtaatgcccacagaggagaacgttgacaggatatgtcaagacttacgaaaccaatta
tatgagtcctactatttgaacttcatctccgcaatctccagaagcaagttggaggacata
gcaagtgctgctctaacagctaatgctgtaaaccaggtgaccaaagtatttgatcaatat
ttgaacttcatcacacttgaagatgatatgttcattctctgcaatcaaaacaaagaacaa
atctcctatcatgcaattaataagccagatatcatggacacagacatggagggcataatg
gacacaatagtggatagtctcttctgcttctttgtcactcttggtgctgtcccaataatc
cgatgtccaagagggaatgctgccgaaatggtagccgtgaaacttgacaagaaactgaga
gagaatctgcgagatgctcgtaacagcctgttcaccggagacaccatgggcactggccag
ttcagcttccagaggccgctgtttgttcttgccgatcgtaacttggatctagcaactcct
ctccaccacacatggacgtatcaggctctcattcatgatgtgctggacttccacctgaac
cgggtcagtgtggaggagtctcaagggtcagaggccagcccagcaggagctcgacccaaa
aagaaaaacaagaagagctatgatctcactgctgctgacagattttggcaaaaacacaaa
ggaagtccattccctgaggttgcagaagccgtgcaggaggaactggatacatatcgagcc
caagaagatgaggttaaacgcctcaagagcatcatgggcttagaaggggaggatgatgga
gccattagtatgttgtcagataacactgccaaacttacctcagccgtcagttctcttcct
gagctcctggaaaagaagagactgattgacctccacaccaatgttgccacagcggttttg
gaccacatcaagagccgtaagcttgatgtgtacttcgagtacgaagagaagcttatgagc
aaatccacactcgataaatccctgctggacattatcagtgatcctgatgctggaacagca
gaggataagatgaggctgtttctgatctattacatcacttcccagcagcccccctctgag
gctgatctagaacagtacaagaaagccatggttgatgcaagctgcgacctatcctcactt
aactacataaagcagtggaaagctttcaccaagatggctgcaacgccagccaattatggg
agcactggagtgaaaccaatgggactgttctcaagggtgatgaacactggctcccaattt
gtgatggagggggtgaaaaatctggtcctgaaacaacataacttgccggttactcgcatc
ttggacaatttgatggaaatgaagtcaaacccggagacggatgactacagatactttgat
cccaagatgcttcgcggaagcgagagctccattccaaggaacaagaacccttttcaagag
gccatcgtctttgtcgtcgggggaggcaattacatagagtatcagaatcttgttgactac
acaaaggccaagcaagggaagcgggttctttatggctgtagtgagcttttcaatgctgcc
cagttcattaaacagctctcccagcttggtcagaaatag
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