Rhinichthys klamathensis goyatoka (western speckled dace): 130069956
Help
Entry
130069956 CDS
T09701
Symbol
cstf3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130069956 (cstf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rkg03019
]
130069956 (cstf3)
Messenger RNA biogenesis [BR:
rkg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
130069956 (cstf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
NRDE-2
TPR_16
TPR_19
TPR_6
Motif
Other DBs
NCBI-GeneID:
130069956
NCBI-ProteinID:
XP_056090141
LinkDB
All DBs
Position
Unknown
AA seq
715 aa
AA seq
DB search
MSTETPPDQAAEYIPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVAQ
FPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYKE
KMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPM
INIEQLWRDYSKYEEGINVHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQ
NSPQEAQQVEMWKKYIQWEKSNPLRTEDQTLITKRVMFAFEQCLLVLGHHPDIWYEAAQY
LEQSSKLLAEKGDMNNAKLFSDEAANIYERAIGTLLKKNMLLYFSFADYEESRMKHEKVH
SIYNRLLGIEDIDPTLVYIQYMKFARRAEGIKSGRSIFKKAREDLRTRHHVYVTAALMEY
YCSKDKSVAFKIFELGLKKYGDIPEYILAYIDYLSHLNEDNNTRVLFERVLTSGSLSPEK
SGEIWARFLAFESNIGDLASILKVERRRFMAFKDEYEGKETALLVDRYKFMDLYPCSPCE
LKALGYKDVSRAKYALIQEAVVTPSTPAQKDEADRKPEYPKPDTSQMVPFQPRHLAPPGL
HPVPGGVFPVPPTAVILMKMLPPPSCFTGPFVQIDELMDSLRRCVLPETVDAAVELITGK
QLDMTSEGNGPVENHAVANKSLKRPNADSDEEDDKGSIAPPIHDIYRARQQKRIR
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgaaactccaccggaccaggcagcagagtacatcccagagaaggtgaagaaa
gcagagaagaagttggaagaaaacccatatgacctcgacgcttggagcatactgattcgt
gaagcacagaatcaacccatagacaaagcaaggaagacatatgagcgacttgtcgcccag
tttcccagttcgggcagattctggaagctatacattgaagctgagatcaaggctaaaaac
tatgacaaggttgaaaagttatttcagaggtgcttaatgaaggttctgcacattgacctg
tggaagtgctacctctcatatgtccgggaaaccaaaggaaaactacccagctataaagaa
aagatggcacaagcttatgattttgctttggataagattgggatggagattatgtcctat
cagatttgggtggattacatcaatttcctcaaaggcgtagaggccgtggggtcgtacgct
gagaaccagcggatcacagccgtcagacgcgtgtaccagaggggttgtgttaaccccatg
attaacattgagcagctctggagggactacagcaaatatgaagagggcataaatgtgcac
ttggctaaaaagatgattgaagaccggagcagagactacatgaatgccaggagagtagcc
aaggagtatgagactgtgatgaagggtttggaccggaacgccccctcggtgccgccccag
aactccccacaggaggcccagcaggtggagatgtggaagaaatacatccaatgggagaag
agcaacccactgcgcaccgaagatcagactctcatcaccaagagagtgatgttcgccttt
gagcagtgccttttggttctcgggcatcaccctgacatctggtacgaggcggcccagtac
ctggaacagtccagcaaactgctcgccgaaaaaggggacatgaacaatgccaagctgttc
agtgatgaggcggctaacatctacgagcgtgccataggaactctgctcaagaagaacatg
ttgctgtatttctcttttgcagactatgaagagagtcgcatgaagcatgagaaggttcat
agtatatacaaccgtctcctggggattgaagatatcgaccctactttggtctatatacag
tacatgaaattcgccagaagagctgaaggcattaagtccggtcgctccatctttaagaag
gccagagaggatcttcgcacacggcatcatgtgtacgtcactgctgctctgatggaatac
tactgcagcaaggacaaatctgtggcctttaagatatttgagcttggactgaagaaatac
ggtgacattcctgagtacattttggcgtacattgattacctctctcacctgaacgaggac
aacaacaccagagtcctgtttgagagagtcctgacgtccggcagtctttcccctgagaaa
tctggggaaatctgggcgcgcttcttggcctttgagagcaacatcggggacttggccagt
atcctgaaggtggagcgaaggcgtttcatggcctttaaagacgaatatgagggaaaggag
acggctctactggtggacagatacaagttcatggatttgtatccctgctccccctgtgag
ctcaaagcccttggttacaaggacgtgtcccgtgccaaatacgcactgattcaggaggcg
gtggtcactccttccactcctgcgcaaaaagacgaggccgaccgcaaacccgagtacccc
aaaccagacaccagccagatggttcctttccagccgcgtcatctggcacctcctggacta
catcctgttcctggaggagtgtttcctgtccctcccactgctgtcatcctcatgaagatg
ctgcctcctcccagctgttttacaggtccctttgtacagatagatgagctgatggattct
ctcagaagatgtgtattgccagaaactgtagatgctgctgtagagttgatcactgggaaa
cagttagacatgaccagcgaaggaaacgggcctgtggaaaaccacgctgttgcaaacaag
tccttgaaaaggcctaatgcggattcagatgaagaggacgacaaaggatccatcgcacct
cccatccacgacatctatcgagcgcgacagcagaagaggatccgatga
DBGET
integrated database retrieval system
