Rhinichthys klamathensis goyatoka (western speckled dace): 130069959
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Entry
130069959 CDS
T09701
Symbol
irf2bp1
Name
(RefSeq) interferon regulatory factor 2-binding protein 1
KO
K22383
interferon regulatory factor 2-binding protein
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130069959 (irf2bp1)
04121 Ubiquitin system [BR:
rkg04121
]
130069959 (irf2bp1)
Transcription factors [BR:
rkg03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
130069959 (irf2bp1)
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
Atypical E3
130069959 (irf2bp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-2BP1_2
zf-C3HC4
RING_XB3-XBAT31
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
130069959
NCBI-ProteinID:
XP_056090147
LinkDB
All DBs
Position
Unknown
AA seq
612 aa
AA seq
DB search
MSSSSQASSRRQWCYLCDLPKMPWAMIWDFSEAVCRGCVNYEGADRIELLIDTARQLKRT
HVMQDGRSPGPQPAGKHGPAGKEGPMETGRPPSERYERGRGDYVSGRLPNGLPRLEDGGP
PEVSRQSPTARRTLVGAVPPSLMAQGLVGAPHGLLTAMPGLNARTGGAPLTISAPMLNEI
SKRQALGMGMNVGVASFMSPEFERELKEKQRNAEALTELSESVRNRTDEWPGRPKHMRDA
LHTLSSCTPFNVRFKKDHGLVGRVFAFDAKVMVEFELKVFVEYPCGSGNVFSSVLALVKQ
MFHDSQKDTGKVINSGYKYVEYEKRHGTGDWRLLSELLSDAVRAFKDAPAPDALPQSYLD
ASCSMLPTALCHIGRPAQPRVRRRKASPEPEATERMTSEEIRQHWSLVYPGIPGHMPAAS
LASAGQPPEAHSSDPSPITALMSVADNVGTATLKDAPGSSGSHSANAGRQNSTSPSPAGG
QRRLASRNGEPSAGSSSGGPTTTVTIPLADQSAVMGAEGSGGAGGGAPLCCTICHERLED
THFVQCPSVPGHKFCFPCTRDFIRRQGSGSEVYCPSGEKCPLVGSNVPWAFMQGEISTIL
AGDVKVKKERDP
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcttcctcgcaggcatcttccaggcggcaatggtgctacctttgcgacctgcca
aagatgccctgggccatgatttgggacttcagcgaggccgtgtgcagaggctgtgtgaac
tacgagggcgcggacagaatcgagttgctcatcgacacggcgcggcagctcaagcgaaca
cacgtgatgcaggacggcagatctccgggtccgcagcccgccggtaaacacggtcccgct
ggcaaggagggtcctatggagaccggtagaccgccctccgagcgatatgagcggggaagg
ggagattatgtgtccggcaggctgcccaacgggctgcctagactggaggatggtggtccg
cctgaggttagtaggcagagtcctactgccaggaggactttggtgggggctgtgccaccc
agtttaatggcgcaggggcttgtcggagcccctcatggtctgctgaccgccatgcctggt
ctgaatgcccgaaccggtggcgcccccttgaccatttctgctcccatgttgaacgagatc
agtaaaagacaagccctgggcatggggatgaacgtgggtgtggcgtctttcatgagccct
gagtttgaaagggagcttaaggagaagcagaggaacgctgaagccctcaccgagctctcc
gaaagcgtgaggaaccgcacggacgaatggcccggacgccccaaacacatgcgcgacgcc
ctgcacaccctatctagctgcaccccgtttaatgtccgctttaagaaggaccacggcctg
gtggggagggtgttcgcgttcgacgccaaggtgatggttgagtttgagctgaaggttttc
gtcgagtacccgtgcgggtcaggtaacgtgttctccagcgtgttagcgctagtcaagcag
atgtttcacgactctcagaaagacactggcaaggtcattaactcgggctacaagtacgtg
gagtatgagaaaaggcatggcaccggcgactggcgtctcctgtcagagcttctcagcgac
gcggtgcgggcgttcaaagacgcgccagccccggacgccctcccgcagtcgtacctggac
gccagctgctccatgttgcccaccgcgctctgccacatcggccgtcccgcgcagccgaga
gtacgccgacgcaaagcctcgcccgagccggaagccaccgagaggatgacctcagaggaa
atccgccagcactggtccctcgtgtaccctggcattcccggccacatgcccgctgcatcg
ctagccagcgcaggacagcctccagaggcccacagtagcgacccttcgcccatcactgct
ctcatgagtgtggctgacaacgttggcactgccaccctgaaagatgctccgggcagcagc
ggaagccactccgccaacgcaggccggcagaacagcaccagtccttcacccgctggcggt
cagcggcggctagcgtcacgcaacggggaaccgtcggctggcagtagctcaggagggccg
accacgaccgtcaccatccccctcgcggaccagagcgctgttatgggagctgaaggctca
ggaggagccggaggcggagcccctctctgctgtaccatctgccacgagcgcctggaggac
acacacttcgtccagtgtccatcggtgcccgggcacaagttctgcttcccctgcacccga
gacttcatccgcagacagggctcggggagcgaggtgtactgccccagtggggagaagtgc
cctctcgtgggctccaacgtgccctgggccttcatgcaaggcgagatctccaccatcctg
gcaggtgatgtgaaggtgaagaaggaaagagacccctaa
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