Rhinichthys klamathensis goyatoka (western speckled dace): 130069999
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Entry
130069999 CDS
T09701
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130069999
04121 Ubiquitin system [BR:
rkg04121
]
130069999
Transcription factors [BR:
rkg03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
130069999
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
130069999
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
hAT-like_RNase-H
DUF659
Chordopox_A30L
Sina_RING
Motif
Other DBs
NCBI-GeneID:
130069999
NCBI-ProteinID:
XP_056090213
LinkDB
All DBs
Position
Unknown
AA seq
640 aa
AA seq
DB search
MAEGNDSAREIFQPSKRTKSEVWSYFGYFKSPEGNLIEDGHPVCKSCKRKVAAKGGNTSN
LLSHLRDNHPLLYSECKSGRALGKPSDASGPSTPSSSTAVTQTLEQAFKRQTAYAPTSKN
ARDLTAAISYFIAKDMMPFQIVERPGFLRLMKVAVPHYKVPSRKYFSKTEIPNLYNQVKA
DVLKKLAQGTWFAATTDLWTSESGGGQPYISVTIHYLTPDWQLESNCLETQFFPEDHSAQ
NISEFFDNMLEEWGINKKDLVCITTDNATNMIKAFEEFSEVWLGCFGHNLNLAISKALKI
QRVETAVKACRHLVQGFSRSWKRRRELRQKQAALNMPQKALIHDVVTRWGSTHKMVERFL
SQQQPVCATLAGERGTWHLMPKDTDITVMEQLCQLLEPLSKLTDALASETRVTLSAIKPV
LDHINSDVLVEKDTDTSLTKEMKKLMREDLKNRYPDKAKRVMNMACFIDPRFKRSSLDEP
EASKIETDCVQEAVKLAAQVREEPQSTSTSSSISTSTPPAASEGKGLAGLLRKISSVTRQ
QRGEEGQIPTTLEDSVKQEIKVYLSLPPIPAEEDPLVWWKGHASELPHLARVARKLLCIP
ATSVPSERVFSASGHIVSPQRALLKPDKVNMLTFLHFNLK
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaggcaatgacagcgctcgggagatttttcagccatccaagaggacaaaatcg
gaggtgtggtcgtattttggctatttcaagagtcccgagggcaatttaatcgaggatggg
caccctgtctgcaaatcttgcaagaggaaagttgctgcaaaagggggaaacacgtcaaat
ctgctaagtcatctacgtgacaaccacccactgttatatagcgaatgcaagagtgggcgt
gcattaggaaaacccagtgatgcttctggtccctcgactccctcctcatctacagctgtg
acacagacacttgaacaagcatttaaaaggcagactgcttatgcacccacatcaaaaaat
gcacgagacctcactgcagctatttcatatttcattgcaaaggacatgatgccatttcaa
attgtggagaggcctggttttctgaggctgatgaaagttgctgtaccacactacaaagtg
ccatcacgaaaatatttttccaaaactgaaataccaaatctgtacaaccaggtcaaagct
gatgttttaaaaaaattagctcaaggaacatggtttgctgcaactactgacctctggact
agtgaaagtggtggtggtcaaccctacataagcgtcactatccattacctcactccagac
tggcaactggaatcaaactgcctcgaaactcagttcttcccagaagatcactcagctcaa
aacatcagcgagttttttgataacatgctggaagaatgggggatcaacaaaaaagacctg
gtctgcataaccacagacaacgcaacgaacatgataaaggcttttgaagagttttcagaa
gtgtggcttgggtgctttggccataatttgaacctggccatctcaaaggctttgaaaata
cagagagttgaaacagcagtcaaggcctgccgtcatctggtccagggcttctcacggagc
tggaagagaaggcgagaactgaggcaaaaacaagctgccctcaacatgccacagaaggct
ctaattcatgatgtggtgactcgatggggatctacacacaagatggttgagcggttcctt
agtcaacagcaaccagtctgtgcaacactggctggagaaagaggaacatggcatctaatg
cccaaggataccgacataactgtcatggagcaactgtgccagctcctcgaacctctgagc
aagttaacagatgcacttgcctcagaaacacgagtaacactctcagcaatcaagcctgtc
ctggaccacattaattctgatgttctggtggaaaaggacacagatacatccctgaccaag
gagatgaaaaagttaatgagagaagacctcaaaaatagatacccagataaggcaaagaga
gtcatgaacatggcttgtttcattgacccccgcttcaaacggagctctttagatgagcct
gaggcttcaaaaattgaaactgactgtgtccaggaagctgtgaagctggctgcacaagtc
agggaagaaccacaaagcacctccaccagcagcagcatctctaccagcactccaccagca
gcatcggaggggaaaggccttgccgggttgctgagaaagatttcttcagtgacaaggcag
caaagaggtgaagagggtcagattccaaccactctagaagacagtgtgaaacaagaaatc
aaagtctacctgtctctgcccccaattccagcagaagaggatccactggtgtggtggaag
ggccatgcatcagagctgcctcaccttgccagggttgccaggaagcttctgtgcatccca
gcaaccagcgtgccatcagagagagtgttcagtgccagtgggcatattgtctctcctcaa
agagcattacttaaaccagacaaagtaaacatgctgacatttttgcatttcaatctcaag
tga
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