Rhinichthys klamathensis goyatoka (western speckled dace): 130070067
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Entry
130070067 CDS
T09701
Symbol
rfx1b
Name
(RefSeq) MHC class II regulatory factor RFX1 isoform X1
KO
K09173
regulatory factor X 1/2/3
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130070067 (rfx1b)
Transcription factors [BR:
rkg03000
]
Eukaryotic type
Other basic domains
RF-X
130070067 (rfx1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BCD_RFX
RFX_DNA_binding
RFX1_trans_act
ThermoDBP-RP_arch
Motif
Other DBs
NCBI-GeneID:
130070067
NCBI-ProteinID:
XP_056090323
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All DBs
Position
Unknown
AA seq
837 aa
AA seq
DB search
MATSGYTAEDLQPSQSQGGNVTTASSTQQKATSTTGTSQFLSDMQSSPGSASSQAGSIIR
AQATPLVTQKKAVLATPPQGPQYVTGEIQSPASQAGNGQSAQYIVVTVTEGSVHSNDSES
SSPPAGQTGVPTQVVQQVQTAQQRSVVQAVTKSQSGQLGVSNLHITPEHVYSGQFVEGDA
SYNDAAIRSNSYSFADPSLYPQATPSVTYYETSPTTGSQVTSPATTQAVSVTSGTGTGVV
SMFSEGSSGITVVTGGASSEVGGAGGVATGGGAGSYVIQGGYMLGGGNQNFSHNTRASPA
TVQWLMDNYETAEGVSLPRCTLYCHYLLHCQQTKLEPVNAASFGKLIRSVFMGLRTRRLG
TRGNSKYHYYGLRIKSNSPLHRLVEDQQHLAMRQQPYSQKQRIKPVQKVEGLTNGMGLGV
GHQQGAGLSDISAQVHQYQQFLDASRSLPEFPVIEDEGKFLPDGLLPQHIHTYQLIYREH
CEAILDVMVNLQFPLVETLWKSFWRFSEGQTSDTDTLDLNDESEKRLPKSVLVLLCKYEP
VLHWTRECDNLLYQSLVEILIPDVLRPIPSALTQAIRNFAKNLENWLTNAMISIPEEMVR
IKVVCAGAFAQTLRRYTSLNHLAQAARAVLQNTAQITQMLSDLNRVDFTNVQEQASWVCG
CEDGMVQRLEQDFKITLQQQNSLEQWAAWLDGVVSQVLKPYTDSQTLPKAAKLFLLKWSF
YSSMVIRDLTLRSAASFGSFHLIRLLYDEYMYYLIEHRVAQAKGETPIAVMGEFACLNRS
QSSMDPDKDEEEDDETDETDEDQDMAVPDNSVVLGEESLEPPTKLARTELFNNTTQN
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atggcaacttcaggctacaccgccgaggatcttcaaccctcccagtcgcaagggggcaac
gtcacgacagcctcatcgacccagcagaaagccacgtccaccaccggcacgtctcagttc
ctgtccgacatgcagagctctccggggtccgcttcatcacaggcggggtctatcataaga
gcacaggccacgccattggtcactcaaaagaaagcagtcttggccacgccccctcaggga
ccgcagtacgtcacaggagagatacaaagccccgcctcccaggccggaaacggccagagc
gcccagtacatagtggtgaccgttactgagggctcggttcactcaaatgactctgaatct
agttctcctccggcgggacagacaggtgtacccacacaggtagtgcaacaggtgcagaca
gcacagcagaggtcagttgttcaggccgtaaccaagagtcaaagtggacaactgggggtc
agtaatctacacatcacacctgagcatgtgtactcaggccagtttgtggagggagacgcc
agctacaacgatgctgcaattcgttccaatagttactcgttcgcagacccctccctctac
cctcaagccacgccctctgtcacttattacgagacctcccccaccaccggctcccaggtc
acgtcccccgccaccactcaggctgtgtctgtgacgtccgggacgggcacaggggtggtg
tccatgttctcagagggcagttcggggatcaccgtggtgactggcggggcttcgtcggaa
gtgggcggggcaggaggcgtggccaccggcggaggggcggggagttacgtgattcagggc
gggtacatgctcggcggagggaaccagaatttctcacacaacacgcgcgcttcacctgcg
actgtgcagtggctgatggataactacgagacagctgaaggtgtaagtcttcctcgctgt
actctctactgtcattacctcctgcactgccagcagaccaagctagaacctgtgaacgcc
gcctcctttggaaaactcatccgctccgtgttcatgggcctcagaaccagacgtctcggc
accagagggaactcgaagtaccattactatggccttcgaatcaagagcaactcccccctg
cacaggctggtagaggaccagcaacacctggccatgagacaacagccgtactcgcaaaaa
cagagaataaagcctgtgcagaaggttgaaggactgaccaatggaatgggcctgggggtg
gggcatcaacaaggggcggggctatccgacatcagcgcccaggttcaccagtatcagcag
tttttggatgcgtctcgcagtctgccggagttccctgtgatcgaggatgagggtaaattt
ctgccggacggactccttcctcaacacatacacacatatcagctgatctacagagagcac
tgcgaggccattctggacgtgatggtaaacctgcagttccctcttgtggagacgctgtgg
aagagcttctggaggttcagtgaaggacaaaccagcgacacggacacacttgaccttaat
gatgaatcagagaagcgtttgcccaagtcagttctggttctgttgtgtaaatatgagccc
gtcctccactggacccgtgaatgcgacaacttgctgtaccaaagcctagtggaaatcctc
atccctgatgtcctgagacccatccccagtgccttaactcaagccatccgtaactttgct
aagaatctggagaactggctcactaacgccatgatcagcatcccggaggagatggtccgc
atcaaggtggtgtgtgcgggagcgttcgctcagactctgcggcgctacacgtctctcaat
catctggctcaggcggctcgcgccgtcctgcagaacacggctcagatcacacagatgctc
agcgacctcaaccgcgtcgacttcaccaacgtacaggagcaggcctcgtgggtgtgtggc
tgtgaagatggcatggtccagcggctggagcaggactttaagatcaccctgcagcagcag
aactctctggagcagtgggcggcatggctggatggggtggtttcacaggtcctgaagccg
tacaccgacagccagaccttacccaaagcggccaaactcttcctgctcaagtggagcttc
tacagttcaatggtgatcagagatctgaccctgcgcagcgcagccagtttcggctcgttt
catctgatccgactgctgtatgacgagtacatgtactacctgatcgagcacagagtcgca
caggccaaaggagagacgcccatcgctgttatgggagagtttgcctgtctgaacagaagt
cagagttcaatggatccggataaagatgaggaagaggacgatgagacggatgagacggat
gaggatcaggacatggctgttccggacaactctgtggttctgggggaggagtcactggag
ccgcccacaaaactggccagaacggagctgttcaacaacaccactcagaactaa
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