Rhinichthys klamathensis goyatoka (western speckled dace): 130070091
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Entry
130070091 CDS
T09701
Symbol
prpf39
Name
(RefSeq) pre-mRNA-processing factor 39
KO
K13217
pre-mRNA-processing factor 39
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rkg03041
]
130070091 (prpf39)
Spliceosome [BR:
rkg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
130070091 (prpf39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
NRDE-2
TPR_MalT
TPR_16
Baculo_PP31
DUF2383
Motif
Other DBs
NCBI-GeneID:
130070091
NCBI-ProteinID:
XP_056090348
LinkDB
All DBs
Position
Unknown
AA seq
750 aa
AA seq
DB search
MEDSAEPMTGMLDTNAPDNGDSSAMEGSEPTTPDWTTAPAPLPEPETHESAVEQLQLFSL
EHLKSAAENIDPKTSPSDPVLENSDPVDGQQAESNGDVVDQSVEPDPVKQEGDSESPSNM
ELEDAPKEEDPAEPGAETAAEPAEPQEPEFPTEYERLSKVVEENPEDFNGWVYLLQYVEQ
ENHLVASRKAFDSFFLHYPYCYGYWKKYADIERKHGYIQMADEVYRRGLQAIPLSVDLWL
HYITFLRENQDTSDGEAENRIRASYEHAVLACGTDFRSDRLWEAYIGWETEQDKLANVTA
VYDRILCIPTQLYSQHFQKFKEHVQSNNPKHFLSEEEFVALRVELANANKPSGDDAPGEE
LPPGTEDLPDPAKRVTEIENMRHKVIETRQEVFNHNEHEVSKRWAFEEGIKRPYFHVKAL
EKTQLHNWREYLDFELENGTPERVVVLFERCLIACALYEEFWIKYAKYLESYSTEGVRHI
YKKACTVHLPKKPSVHLLWAAFEEQQGSIEEARSILKAFEEGVPGLAMVRLRRVSLERRH
GNMDEAEALLRDAITNGKNSSESSFYAVKLARQMVKVQKSIGKAKKVLMEAVEKDETNPK
LYLNLLELEYSGDVQQNEPEIIACFDRALSSSMPLESRVTFSQRKVEFLEDFGSDINVLV
AAYEQHQRLEAEQETLKRKAENGSEEPDAKRQRTDDQSAASAQMMDMQANNAGYNYNNWY
QQYNSWGGQNSWGQYGQYGQYNQYYPPPPT
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggaagattctgctgagcccatgaccgggatgttggacacgaacgcccctgataacggg
gactcgtctgcgatggagggctcagaaccgaccacacccgactggaccacggcgccggct
cctctcccagaaccggaaacccacgagtccgccgtggagcagttacagctgttctcgctg
gagcatctgaagtccgcggcggaaaacatcgacccgaagaccagcccttcagatcccgtt
ctggaaaactcagacccggttgacgggcagcaggcggaatcgaacggagacgtcgtggac
caatcggtggagccggatccggtgaaacaggagggagactccgagagcccttccaacatg
gagctggaagatgctcccaaagaagaagacccagcagaaccaggagccgaaacagcagca
gaaccagccgaaccacaagaacccgagtttcccacagagtacgagcgtctctcgaaggtc
gtggaagagaatccggaagactttaatggatgggtctaccttctgcagtatgtggagcaa
gagaaccacctggtggcgtcaaggaaggcgtttgattcctttttcctgcactatccttac
tgttatggctactggaagaaatatgctgatattgagaggaaacatggttacatccagatg
gctgatgaggtgtaccggcgaggtcttcaggccatcccgctcagcgtggacctgtggctt
cattacatcacgttcctgcgagagaaccaggacaccagcgacggggaggcggagaaccgc
atccgagcgtcctatgagcacgcggttctggcgtgcggcacggacttccgctcggaccgt
ctgtgggaggcttacatcggctgggagacggagcaggacaagctggccaacgtcacggcc
gtgtacgaccgcatcctctgcatccccacacagctgtactcgcagcacttccagaagttc
aaagaacacgtgcagagcaacaaccccaagcacttcctgtcggaggaggagttcgtggcg
ctgcgagtggaactagctaatgctaacaagcctagcggagacgacgcccctggcgaagag
cttccgccgggcacggaggacctgccagatcccgcaaagagagtgacggagatcgagaac
atgaggcacaaggtgatcgagactcggcaggaggtgttcaaccacaacgagcatgaagtc
agcaagcgctgggccttcgaggaggggatcaagcgcccgtacttccacgtgaaggccctg
gagaagacgcagctccacaactggagggagtacctggacttcgagctggagaacgggacg
ccggagcgcgtggtggttctgttcgagcgctgcctcatcgcctgcgcgctgtacgaggag
ttctggatcaagtacgccaagtatctggagagctacagcaccgagggcgttcggcacatc
tataagaaggcatgcacggtccaccttcccaagaaaccctccgttcacctgctctgggcg
gcctttgaggagcagcaaggcagcatcgaagaggcccggagcatcctgaaggcgttcgag
gagggcgtgccgggactggccatggtgaggctgagacgggtgagtctggagcgccggcac
gggaacatggacgaagccgaggctttgctgcgggacgccatcaccaacgggaagaacagc
agcgagtcctccttctacgccgtgaagctggcgcggcagatggtcaaagtgcagaagagc
atcggcaaggccaagaaagtgctgatggaggccgtcgaaaaagacgagacgaacccgaag
ctgtatctgaacctgcttgagctggagtacagcggagacgtccagcagaacgagcccgag
atcatcgcgtgctttgaccgagcgctgagcagctccatgcccctcgagtcacgcgtcacc
ttctcccaacgcaaggtcgagttcctcgaggacttcggcagtgacatcaacgtacttgtg
gcggcatacgaacagcatcagcggctcgaggcggagcaggagacgttaaagaggaaagca
gagaacggctcagaggagccggacgcgaagagacagcgaacagacgaccaatcagcggcc
tcggctcagatgatggacatgcaggccaacaatgcaggatacaactataacaactggtat
cagcaatataactcgtggggaggtcagaattcctggggtcagtacggtcaatacggtcag
tataaccagtactacccaccgcctcccacataa
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integrated database retrieval system
