Rhinichthys klamathensis goyatoka (western speckled dace): 130070112
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Entry
130070112 CDS
T09701
Symbol
yy1b
Name
(RefSeq) transcriptional repressor protein YY1b isoform X1
KO
K09201
transcription factor YY
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03082
ATP-dependent chromatin remodeling
rkg03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130070112 (yy1b)
03083 Polycomb repressive complex
130070112 (yy1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130070112 (yy1b)
03036 Chromosome and associated proteins [BR:
rkg03036
]
130070112 (yy1b)
03029 Mitochondrial biogenesis [BR:
rkg03029
]
130070112 (yy1b)
Transcription factors [BR:
rkg03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
130070112 (yy1b)
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
130070112 (yy1b)
Mitochondrial biogenesis [BR:
rkg03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
130070112 (yy1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
TFIIIA_zf-C2H2
Raffinose_syn
zf-C2H2_ZN142
IBR
DUF7496
Motif
Other DBs
NCBI-GeneID:
130070112
NCBI-ProteinID:
XP_056090369
LinkDB
All DBs
Position
Unknown
AA seq
444 aa
AA seq
DB search
MRVHASPTASPLLSRDLEEERSSGDVNSCEKWRVICVIGVCGYQGVCLCICVCLRGSERA
IRAFNATAKASKLADFDMASGETLYIEADGSEMPAEIVELHEIEVETIETTVIDGDDEDE
HQPMIALQPLGTDDPGQVHHQEVILVQTREEVVGGDDGFEDQILIPVPVPGAEDEYIGQT
LLTVAGKSSMGRVGKRAGSVGKKAGKRSYLSAAEASGRKWEQKQVQIKTLEGEFSVTMWA
SDDKKDIDHETVVEEQIIGENSPPDYSEYLTGKKLPPGGIPGIDLSDPKQLAEFASPFGN
SGGHFARSPVRMKPRKIKEDDAPRTIACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAEC
GKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGC
NKKFAQSTNLKSHILTHAKAKSSQ
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtgcacgcgagcccgacagccagtcccctcctctcgcgagatttggaagaggag
cgtagtagtggcgacgtgaattcatgcgagaagtggagagttatttgtgttatcggagtg
tgcgggtatcagggggtgtgtttgtgtatatgtgtgtgtttgcggggcagcgagcgagcg
attcgtgcgtttaacgcaacagctaaagcgagcaagctggcggacttcgacatggcatcg
ggcgagacgctgtacatcgaggcggacggctcggagatgcccgcggagatcgtggagctg
cacgagatcgaggtggaaaccatcgagactacggtgatcgacggggacgacgaggacgag
caccagcccatgatcgcgctgcagccgctgggcaccgatgacccgggtcaggtccaccat
caggaggtgatcctggtccagacccgggaggaggtggtcggaggggacgacggcttcgag
gaccagatcctcatcccggtgcccgtccccggggcggaggacgagtacatcggccagact
ctgctgacagtcgcggggaagagctccatggggcgggtggggaagagagcgggttcggtg
ggcaagaaagcgggtaaacggagttacctgagcgcggcggaggccagcgggaggaagtgg
gagcagaagcaggtgcagatcaagactctggagggcgagttctccgtcacgatgtgggca
tcggatgacaagaaggacatcgatcatgagactgtggtggaggagcagatcatcggggaa
aactctcctccggattattccgagtacttgacgggaaagaaactcccgcctggaggaatc
ccgggaatcgacctgtcagacccgaagcagctggcagagttcgccagccccttcggtaac
agtggcggtcattttgctcgtagtcccgttcgaatgaagccgaggaagatcaaggaggac
gacgctcctagaacgatagcctgtccacacaagggatgcactaaaatgttcagggataat
tcagccatgaggaagcaccttcacacgcacggcccgcgggttcacgtgtgcgccgagtgc
ggaaaggccttcgtggagagctccaaattaaagcgccatcagctggttcacacaggagag
aaacccttccagtgcacgttcgagggctgtgggaagcgcttctcgctggactttaacctg
cggacgcacgtcagaatacacaccggggaccggccctacgtttgcccgttcgacggatgc
aataagaagtttgctcagtccaccaacctcaaatcacacatcctcacacacgccaaagcc
aagagcagccaatga
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