Rhinichthys klamathensis goyatoka (western speckled dace): 130070120
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Entry
130070120 CDS
T09701
Symbol
sntb1
Name
(RefSeq) beta-1-syntrophin
KO
K24064
beta-syntrophin
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130070120 (sntb1)
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Paralog
GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
130070120
NCBI-ProteinID:
XP_056090377
LinkDB
All DBs
Position
Unknown
AA seq
514 aa
AA seq
DB search
MAVCGNRVQKSACLEVLVRERWHAVLASLSDESLTLSCEDPATDTSVNLNGITTNGSYDQ
PDPTNSPKAGVWTPLTDSQVPEAIANRKRCVKVIKQEVGGLGISIKGGKENKMPILISKI
FKGLAADQTQALYVGDAILSVNGINLRDATHDEAVQVLKKAGREVMLEVKYMREATPYVK
KGSPVSEIGWETPPPESPRLGSPHFDIPSPSLSLQGDRRYIPLKMCYVTRSMTVPDPENR
QMELHSSDAKHTIVMRHTDTASAQTWFTLMQTAITNLTSKVISELREHAGRHSIAGSREI
RYLGWLAEKTESERQRWKPVLVMLTEKDLLLFDSMPRMREHWLSPTHTYPLLATRLVHSG
PDKGSPQPGGELCFATRTGTRLGIEAHLFRAETGKNLSLWTRHIVTGCHASAEMIKEVTT
SCMYQGQDCRLVIHYEQGFSVIADGDDSSVAQTLFSYPFEKLKMSADDGVRILYLDFGGN
EGEIQLDLHSCPKPIVFILHSFLSAKIARLGLVA
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggcggtttgtggtaacagagtgcagaaaagtgcatgtttggaagtgctagtacgggag
cgatggcacgcggtgctggcgagtttaagcgacgagtcgctgacgctcagctgcgaggat
cccgcgacagacaccagcgttaacctcaacggcatcacaaccaacggctcctacgaccag
ccggaccccacgaacagtcccaaagccggagtatggactcctttgacggactcacaagtt
ccagaagcgattgcgaaccgtaaaagatgtgtcaaagttatcaagcaggaggtcggtgga
ttagggataagcatcaaaggcgggaaggagaacaagatgcctattcttattagtaagata
ttcaagggtctggctgcggatcagactcaagcgctctatgtgggggacgcgatactgtcc
gtgaacgggatcaatctgcgggacgccacgcacgacgaggcggtacaggtgctgaagaaa
gcgggcagagaagttatgctggaagtgaaatacatgcgggaagcaacgccatatgtgaaa
aaaggctcaccggtgtctgagattggctgggagaccccgcctcctgagtcccctcgtctc
ggcagtcctcacttcgatatccccagcccctcactgtccttacagggcgaccgcagatac
atccccctcaaaatgtgctacgtcacccgcagtatgactgtccctgacccagaaaacagg
cagatggagctgcactcctctgatgctaagcacacaatagtcatgaggcatacagacaca
gcctctgcccagacctggttcactctcatgcaaactgccatcacaaacctcaccagcaaa
gtcatcagcgaactccgagaacacgccggccgccacagcatcgccgggagtcgagagatc
cgatacctcggctggctagcggaaaagacggaaagtgaaagacagcgctggaagccggtg
ctcgtgatgttgacggagaaagacctgctgctgtttgacagcatgccacgcatgagagaa
cactggctcagcccgacacacacctaccctctgctcgccacacggctggtacattctggt
ccagataagggttcaccacagcctggtggcgagttgtgctttgctacacgaacgggaacc
agattgggtatcgaagcccatctcttcagagcagagacgggcaagaacctgtcactctgg
accagacacatagtcactggctgccacgcatctgccgagatgatcaaagaagtcactacc
agttgtatgtatcagggtcaggactgtcggttggtcattcactatgagcaaggcttctct
gtcatagcagatggagacgacagctctgtggcacagacacttttcagctacccgtttgaa
aagctgaagatgtctgctgacgacggcgtacggatcctctatctggattttggtggaaac
gagggtgaaattcaactggacttgcactcctgtcccaagcctattgtttttatcctccac
tccttcctatcagccaagattgcaagattaggattggtagcctga
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