Rhinichthys klamathensis goyatoka (western speckled dace): 130070196
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Entry
130070196 CDS
T09701
Symbol
vps35l
Name
(RefSeq) VPS35 endosomal protein-sorting factor-like
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130070196 (vps35l)
Membrane trafficking [BR:
rkg04131
]
Protein recycling
Others
Retriever complex
130070196 (vps35l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
130070196
NCBI-ProteinID:
XP_056090472
LinkDB
All DBs
Position
Unknown
AA seq
963 aa
AA seq
DB search
MASVQWHSRGRKYESEWQGCHLEGSAVDFSDYHPLKAITVTDSKSRRGGRKGSTSSTSSS
CSSVALDPLSSMLDGTDPLSLFAAASETPTLPHSISAGELGRKRQEKEEEVGLDFEPWSS
KRGEILSRFTTTEKLSINLFMGSDKSKASSPSSAVSEKVRTRLEELDDLEEGSQRELLNL
SQQDYVNRIEELNQSLKEAWGSDQKVKALKIVIQCSKLLSDTSVIQFYPSKFVLITDILD
TFGGLVYDRILAMCADPHPLPESFSADEVNDTAKETCLNWFFKIASIRELVPRLYVEAAL
LKCNLFLTKSGIQETLQRLTAMIRGIGDPLVAVYARAYLCRVGMEVAPHLKDSLNKNFFD
LLASFRQIHGESVQNQLGLQRVEIPIYLTLYSPAIHWILQCVAYRAPEVLLTEMMDRCKK
LGNNALLLNSVMWAFRAEFVATRATDFIGMIKDCDEAGFPKHLLFASLGRSLSCADPPES
ERLSILNEAWKVITKVRGPRDYINCAEIWVEFTCRHFTKREVNTVLADIIKHMTPDRAFE
DAYPQLQSVINKILPYFHDFSVLFSMEKFLPFLDMFQKDSVRVEVCKSIMEVFIKHQQEA
TRDPVILNALLHICKTMHDSVNALTLDDEKRSLALLINGFIRMVSFGRDFEQQLSFCVEA
RATFCNLEPVIIHLIHTVNQLAMETRRVMKGNHSRKTAAFVRACAAYSFITIPSLTSIFS
RLNLYLLSGQVALANQCLSQADAFLKAAVSILPEVPRTISIEGKQRSSEPFFLEFINNFL
STLLVVPDHPEQGVLYLVRGLLNMVQDYTWEDNSDAKVRVYISALPLLAAMSQENYLYTI
PKVDSNETLYGGDPKFIAEINKLCETLIGQVLDHLKTLGRDEGVRRQGGLAFSLFGCLLA
HGDLRNNKLNQLAVNLWNLSHKHGFCETRTSVRTLEYIKHQAQLADMSHLSDITARLSLQ
SRA
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagttcagtggcactctcggggccgtaaatatgagagtgaatggcaggggtgt
catttggagggttcagcagtggatttcagtgactatcatccactcaaagccatcacggtg
acagattctaaatctcggcgtggggggcggaaaggcagcacctcctctacatcttcttcc
tgtagttctgtggctctggatccactcagctctatgctggatgggaccgacccactgtct
ctcttcgctgcggcatctgagaccccaactctcccacacagcatctctgctggggagttg
gggcggaaacggcaggagaaagaggaggaagtgggcttagactttgagccgtggtcatct
aaacgtggagagatcctgtctagattcaccaccacagagaaactgtctataaacctcttc
atgggctcagacaagagtaaagcatccagccccagctcagccgtgtcagagaaggtgcgc
actcgtctggaggagctggatgacctagaggagggctcacagagggagctgttgaacctg
tcccagcaggactatgtgaaccgcattgaagagctcaaccagtctctgaaggaagcctgg
ggttcagaccagaaagtcaaagccctgaaaatcgtcatccagtgctccaagctgctctct
gatacatcagtaattcagttctaccccagcaagtttgttctcatcacagatatcctggac
acctttggtggtctggtgtatgacaggatcttggccatgtgtgctgaccctcatccttta
ccagaatcgttctccgctgatgaagtgaatgacacagccaaagagacgtgtctcaactgg
ttctttaaaatcgcctccatcagagagcttgtccctcgattatatgttgaagctgctctt
ctgaaatgcaacctcttcttgacaaagtctgggattcaggagacgctgcagagactgaca
gcgatgatcagaggaataggagatccgctggtggctgtatatgcacgggcgtatctatgc
agggttgggatggaggtggcgccgcatctgaaggacagtctcaataagaatttctttgac
cttctggcctcattccgtcaaattcatggtgaaagtgttcagaatcagctagggctgcaa
cgggtggagattcccatctatctgaccctctattctcctgccattcactggatcctgcag
tgtgtggcatacagagcaccagaggttctgctaacagagatgatggacagatgcaagaag
ttgggcaacaatgctctcctgctgaactctgtcatgtgggcattccgggcagaatttgtt
gcaacaagagcaacagactttattggcatgatcaaagactgtgatgaagctggatttccc
aagcacttgctgtttgcgtctctgggtcgcagtctgtcctgtgctgaccctccagagagc
gaaagactctccatactcaatgaagcctggaaggtcatcactaaagtgcgcggcccaagg
gattacatcaactgtgctgagatctgggtggagttcacctgccgccacttcacaaaacgg
gaggtgaacacggttcttgctgacattatcaaacacatgactccagacagagctttcgag
gatgcatatccacagctgcagtcagtgataaacaagatccttccctacttccatgacttc
tctgtgctcttctctatggagaagtttttgccctttctggacatgttccagaaagacagt
gtgagggtggaggtgtgtaaatcaatcatggaggtcttcatcaaacaccagcaggaagca
acgagagaccccgtcattctcaatgcgctgctgcacatctgtaagaccatgcacgactct
gtcaatgctctaactctagatgatgagaaaagatctctggctcttctgatcaacggattt
attcgtatggtgtcttttgggagggactttgaacagcagttgagtttctgtgtggaagcc
cgagcgaccttctgtaatctagagcccgtcatcattcacctgatacatacggtgaatcag
ttagccatggagaccagacgtgtgatgaaaggcaatcactcgcgtaaaacggctgctttt
gtcagggcgtgtgctgcctacagtttcatcaccattccatctctcacgagcatctttagt
cgtctcaacctatacctgctctctggacaggtagcgctggccaaccagtgtctgtcccag
gcggacgcatttctaaaggcagcggtcagtattttgccggaagtcccgcgtaccatcagc
attgagggaaaacagcgatcatcagagcccttctttctcgaattcattaacaacttcctc
tccacactgctcgtagtgccggaccatccggagcagggtgtgctgtatctggtgcgaggg
ctcttgaatatggtgcaggactacacctgggaggacaacagtgatgccaaggtccgcgtc
tacatcagcgctttgccgttgctagcagcaatgagccaggaaaactatctctacaccatt
cctaaagtggattccaatgaaaccctctatggaggagatcccaagttcatcgcagagatc
aacaagttgtgtgagactctgattggtcaggttctggatcatttaaagactctgggccga
gatgagggagtgcgcaggcagggcggtctggccttctctctgttcggctgtctgttggct
catggtgatctacggaacaacaaactcaatcagctggctgtcaacctgtggaacctcagt
cacaaacacggcttctgtgagacacgcacatcggttcggactctagagtatatcaaacat
caggcacagctggctgacatgagccatctctctgacatcacagcacgtctgtctctgcag
tcccgagcctga
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