Rhinichthys klamathensis goyatoka (western speckled dace): 130070260
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Entry
130070260 CDS
T09701
Name
(RefSeq) LOW QUALITY PROTEIN: guanylate-binding protein 1-like
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
130070260
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GBP
GBP_C
MMR_HSR1
RHD3_GTPase
YjdP
Motif
Other DBs
NCBI-GeneID:
130070260
NCBI-ProteinID:
XP_056090555
LinkDB
All DBs
Position
Unknown
AA seq
625 aa
AA seq
DB search
MSCREYMPAPACLIENDENGKLCVRKDAKVILDGIKEPVVVVSVVGLYRTGKSYLMNRLA
GQQSGFALGNTVESKTKGIWMWCVPQPKKEGHTLVLLDTEGLGDVDKGDSKNDGWXFSLA
VLLSSTLVYNSRGTIDNNAVENLHYITELTEQIKIRSTEAADEEEEEDSQFVQFFPSFIW
VVRDFTLELEINGETATEDEYLEFALQLKKGVGKKKSDYNLPRECIRQYFPSRKCFVFPI
PVTSQKDMTHLESLQEQDLAQAFLEVTGHFCDHIFFNSAVKTLKGGHRVTGKLLGHLVEI
YVDTISSGKVPCLDNAVVVLANVENQAAVQEAMKVYQTGMEEVKKTFPVTIDNNTCEHQK
FSSLAISEFMKCSFNDEKGQYLKKMEEAVNMYYVHLLEENKTKSERKCQDLLNNLFSDMN
KRLQNGEYSQSGGHDFYCRDRDAIVEQYRREPNKGVSAEAVLTVFLNERGAKANTILCAD
TKLTEIEKQIKEEKENAALLKQKCKEEEEKRIESEQMNAAENKRHEDRVRQMEEKFKKEL
EQRQQEKDRAIESKLKEREEMLKKGFEERATNLKEEINKLQNEKKHLGAGGGAIFKDYVM
PFLCPLLEMVPNLLMQRSMIKCLKG
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgtcgtgagtatatgccagctccagcgtgtctcatcgaaaatgatgaaaatggg
aagctgtgtgtgaggaaagatgctaaagtcattctggatgggatcaaggagccggtggtg
gtggtgtctgtggtgggactctaccgtacggggaagtcctaccttatgaaccgcctggca
ggacaacagtccggctttgctctcggcaacaccgttgagtcaaagaccaaaggcatctgg
atgtggtgtgtccctcaacccaaaaaagaaggacacactctggtgctgctggacacagag
ggactgggtgatgtggacaagggagactctaagaatgacggctggntattttctctggcc
gttctgctcagcagcactctggtgtacaacagccgcggcaccatcgataacaatgcagtg
gaaaatctgcactacataactgagctcaccgagcagatcaagatcagatcgacagaagct
gcagacgaggaggaagaggaggattctcagtttgtgcagtttttcccatcatttatctgg
gtggttagagatttcaccttggaactggaaattaatggagaaacagcaacagaggatgag
taccttgagtttgccctccagctgaagaaaggtgtgggtaagaaaaagagtgactacaat
ctgccccgtgaatgtatccgacagtatttccctagccggaagtgttttgtgttcccgatt
cctgttacctcccagaaagacatgacacacctagagagcttacaagagcaggaccttgct
caagcatttctggaggtcacaggtcatttctgtgaccacatttttttcaatagtgctgtg
aaaacactgaaaggaggacacagagttactggtaaattgctcgggcacctggttgagatt
tatgtggatacaatcagcagtgggaaggtgccctgtctggacaatgcagtggttgttctg
gcaaatgtagagaaccaggcagctgttcaagaagctatgaaagtgtatcagactgggatg
gaagaggtgaagaaaacattcccagtcactatagataataatacctgtgagcaccagaaa
ttcagcagtctagccatttctgagttcatgaaatgctcattcaacgatgaaaaggggcaa
tacctgaaaaaaatggaggaagctgtaaacatgtactacgtacacttgctggaagagaat
aagacgaaatcagaaagaaagtgtcaagatctgctgaataatctgttctctgacatgaat
aaacggctgcagaatggagagtacagtcagtctggaggacatgatttctactgcagagac
agagacgccattgttgaacagtaccgcagagaacccaacaaaggtgtatcggctgaggct
gtgctgactgtgtttctgaatgagcgaggagctaaagcaaacaccatcctctgcgcagac
acaaaactcactgaaattgagaaacaaattaaagaggagaaggagaatgcggctctgttg
aaacagaaatgtaaagaggaagaggagaaacgaattgagagtgaacaaatgaatgcggca
gagaataagcgacatgaggacagggttaggcagatggaggagaagttcaagaaggagctg
gaacagcggcagcaggaaaaggacagagccattgagagcaaactgaaggagcgggaggag
atgctaaaaaaaggctttgaggagagagctacaaatcttaaagaagaaatcaacaagtta
caaaatgaaaagaaacacctaggtgctggtggcggtgccatttttaaggattatgtgatg
ccatttctctgtcctcttttagaaatggttcccaacctccttatgcagagatcaatgatt
aaatgcctcaaaggttga
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