Rhinichthys klamathensis goyatoka (western speckled dace): 130070273
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Entry
130070273 CDS
T09701
Name
(RefSeq) guanylate-binding protein 1-like isoform X1
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
130070273
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GBP
GBP_C
MMR_HSR1
RHD3_GTPase
Motif
Other DBs
NCBI-GeneID:
130070273
NCBI-ProteinID:
XP_056090584
LinkDB
All DBs
Position
Unknown
AA seq
650 aa
AA seq
DB search
MDKPVCLIDTGSEGKLCVQESALQILQQIQEPVVVVAVVGLYRTGKSYLMNRLAGKQTGF
ALGSTIESKTKGIWMWCVSHPTKAGTTLVLLDTEGLGDVDKGDSKHDTNIFCLAVLLSST
LVYNSRGTIDNRAVEELQFVTELTECIKVKSSDEDEDDSSEFVKFFPSFIWAVRDFTLER
KIDGKDATENEYLEFALKLKHGTSKKVMEHNLPRECIQKFFPSRTCFTFPFPTAPDNVSR
LESLDPADLSSEFLDITDRFCKFVFHESHVKKLKDGITVTGRVLSHLVKMYVDTISSGAV
PCLENAVIAMAMIENEAAVKEGLQVYKSGMEKLKDSFPLGLKEVSSEHQHLSSLATQTFM
KRSFRDTDGKYLKSLEENINKLFDGYLCQNEQASKRRCEDLLSSLSEPMTEKLKQGFYAK
PGGYDLFCKDLEDIVKNYNNQANKEVKAEDTLEEFLKQKCVDSNAILQADKKLTEKEKKI
MEERDKAVLLAQEINTKEQKQRQLEEKMEAERRSNEERMRQMKEKMDEEIRLQREEAKRA
MDSKLGEQADLLEKGFKEKADRMTKEMEDFRKKNKEAEKKSDKLFKNMTENMNKRHDETM
KLMMRQHSEQMKAIMSMPRPKSDSSSLILRLLLGGISSVLFSAPSPRKCS
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggataaaccagtctgcttgattgacactgggtcagaagggaagctgtgtgtgcaggag
tcagcactacagatcctgcagcagatccaggagccagtggtggtggtggccgtggtgggt
ctctaccgcaccgggaagtcctacctgatgaaccgcctcgcagggaaacaaacaggattt
gcattgggcagcaccatagagtccaagacgaagggcatctggatgtggtgtgtgtctcac
cccactaaagcaggaaccactctggtgctgctggacacggagggactcggagacgtggac
aagggagactcaaagcatgacactaacattttctgtctggctgtgttactgagcagcact
ctggtctacaacagtcgagggacgattgacaacagggctgtagaggagttgcaatttgtt
actgaactaacagagtgtatcaaggtcaaatcatcagatgaggatgaggacgattcaagc
gagtttgtgaagttcttccctagtttcatctgggctgtgagggacttcacccttgagcga
aagatcgatggcaaagacgcaacagagaatgagtacctagagtttgctctgaagctgaaa
catggcacatcaaaaaaagtgatggagcacaacttgcccagggagtgcatccaaaaattc
ttcccttccaggacgtgcttcactttcccgtttccaactgccccagacaatgtgtctcgt
ttggaaagtttggatcctgctgatctttcctctgagttcctagatatcacagatcgtttc
tgcaagtttgtctttcacgagagccatgtgaagaagctgaaggatggaatcacagtcact
ggcagagttctgagtcatttggtgaaaatgtacgtggacaccatctccagtggggctgtg
ccgtgtctggagaacgctgtgatcgccatggcaatgattgagaatgaggctgcagtgaaa
gaggggcttcaggtttacaagagtggaatggagaagcttaaggactccttccctctggga
ctgaaggaagtgtcctcagaacaccaacatctcagcagcttggcgacacaaaccttcatg
aagcgttccttcagagacactgacgggaagtacctgaaatctctagaggaaaacattaat
aaactctttgatggatacctgtgccaaaacgagcaagcttcaaagagacgatgtgaggat
ctcttgtcatccctctcggaaccaatgacagaaaaactcaaacagggcttctatgccaaa
cctggtggctatgatctcttctgcaaggatctggaggacattgtgaagaattataacaac
caggccaataaagaagtcaaggcagaagacacacttgaagagtttctgaagcagaagtgt
gtggattctaatgccattctgcaggccgacaagaaactgactgagaaggagaaaaagatc
atggaggaaagagataaggctgttctcctggctcaggaaataaataccaaggaacagaag
cagcgacaactggaagagaagatggaagcagagagacggagtaacgaagagaggatgaga
cagatgaaggagaagatggatgaggagatcaggctccagagagaggaggctaagcgtgcc
atggacagcaaactgggggagcaggctgatctgttggagaagggctttaaggagaaggca
gacaggatgactaaagagatggaggacttcaggaagaagaataaagaagcagaaaagaaa
agtgacaagctgtttaaaaatatgacagaaaacatgaacaaaagacatgatgagactatg
aagctaatgatgaggcaacacagtgagcagatgaaggcaatcatgagcatgccgaggcct
aagtcagactcctcctctctaatcttgcgtctgttactcggcggtatcagcagtgtttta
ttctcagctccttctccccgtaaatgcagctaa
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