Rhinichthys klamathensis goyatoka (western speckled dace): 130070360
Help
Entry
130070360 CDS
T09701
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130070360
04121 Ubiquitin system [BR:
rkg04121
]
130070360
Transcription factors [BR:
rkg03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
130070360
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
130070360
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-BED
DUF659
hAT-like_RNase-H
zf-C2H2_12
DBD_Tnp_Hermes
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
130070360
NCBI-ProteinID:
XP_056090708
LinkDB
All DBs
Position
Unknown
AA seq
487 aa
AA seq
DB search
MAANINPAPACLKADVWEHFGFKKTKESNDLDKSVAVCKLCGTKVKYSGNTTNLRAHLKR
HHLDKFMLTEDPKQQRPRDPKQTTLDIDGGCSHKFPSASPRSQKITESIAYFICQDLRPY
SVVENPGFRRMVNAMEPRYPIPTREHLTKVSIPGLYAQTRAHVKASLASAERVALTCDGW
TSRTTEAYVTITAHFINEEWELVTYVLQTRDMPESHTGHNLAEHLRKALAEWGITEKDPV
IVTDNASNMTIAAEEAAFTLHVKCYAHTLNLAAQRALKITAVARLLGRVRRIVSFFRRST
TANHMLKEKQRLLRLPEHKLMTDVVTRWNSAHDMLERFLEQQPAICATLLSSEVRKTEKD
LCTLTESDVTTAEEVVSALKPMKEATQYMSKEKTPTLSVVAPLQDTLINGLKPIEGESAV
IKEMKAAMAGDLQKRYMDLKATLHACSAMDPRFKSLPFLTEDERQEVYDGLIVEAARLSM
QPSEVRQ
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgaatataaatccggcacccgcctgcttaaaagcagatgtgtgggagcacttt
ggttttaaaaaaacaaaggaaagcaacgacttggataaaagcgtcgcggtttgtaagcta
tgtggcactaaagttaagtattccggcaataccacaaatttacgagcgcacctaaaacgt
caccacctggacaagtttatgcttacggaggacccaaagcagcagcggccgcgtgaccca
aaacaaactacgctggacattgatggcggttgttcccacaagtttccgtctgcttcacca
aggtcgcagaaaattacagagtccattgcctactttatttgccaggatttgagaccatat
tcagtggtggaaaaccccggctttaggcgcatggtgaacgcgatggagccccgctatccg
attccaacccgcgaacacctcaccaaggtttccattcccgggctgtacgctcagacaagg
gcacacgttaaagcctccctggccagcgcggagagagttgccctgacgtgcgacggctgg
acctcgcgcacaactgaagcgtatgttaccatcacggcccactttatcaacgaggaatgg
gagctcgttacgtatgttttacaaaccagggacatgcccgagagccacaccggacacaac
ctggcagaacatctgagaaaggccctcgctgagtggggaatcacagaaaaggatccagta
atcgtcactgacaatgcctcaaatatgacaatcgcagctgaggaggcagcattcacactt
catgtcaaatgttatgctcatacactaaatctagctgcacagcgtgccctcaaaatcaca
gcagtcgcacgcctgctgggaagggtgagacgcattgtgagtttcttcagacggagcacc
acagccaaccacatgctgaaagaaaaacagaggcttctacgactaccagagcacaagttg
atgacggatgtagttaccagatggaatagtgcgcatgacatgctggaaagattcctggag
caacaaccggccatctgcgcaaccctgctctcgagtgaagtcaggaagaccgagaaagat
ctgtgcacactgactgagtcagatgtgacaacagctgaagaagtagtcagcgctctgaag
cctatgaaagaggcaacacagtacatgtccaaggagaagacccccacactgtcagtcgtc
gcacccctccaggacacactgatcaacggactgaaaccgatcgaaggtgaatctgcagtc
ataaaagagatgaaggctgccatggctggggatcttcagaagaggtatatggacctcaag
gcaactctccatgcctgttcagcgatggatccaagattcaaaagtcttcccttcctgact
gaagatgaaagacaggaagtttatgatggactgattgtagaggctgcaagactgagcatg
cagccatcagaggtaaggcagtga
DBGET
integrated database retrieval system
