Rhinichthys klamathensis goyatoka (western speckled dace): 130070469
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Entry
130070469 CDS
T09701
Symbol
rorc
Name
(RefSeq) nuclear receptor ROR-alpha B isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130070469 (rorc)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
rkg03310
]
130070469 (rorc)
Transcription factors [BR:
rkg03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
130070469 (rorc)
Nuclear receptors [BR:
rkg03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
130070469 (rorc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
130070469
NCBI-ProteinID:
XP_056090848
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All DBs
Position
Unknown
AA seq
505 aa
AA seq
DB search
MENDEPASPDPNHDNTQRGNPVHKKSHLTQIEVIPCKICGDKSSGVHYGVITCEGCKGFF
RRSQSSSVQYSCSRQSNCPIDRASRNRCQSCRLKKCVAQGMSRDAVKFGRMSKRQRDSLF
AEVERHRQQQRLQANSVQEPQSLPAYRSGKEPREQTSHLIPPLPQAYPYSVEPELPGCPP
EVHPYLECRIGEAQAQSLAYRVSHRRGESNSLSAGRGFDSTRSTPETILNMSGSEMGFRP
FDPESSFFSYPTSLHIEELSASIVRSHRETTQYRPEELQALRWKVFSREEIHAYQSKSVD
EMWQHCAVRLTDAVQYVVEFAKRIPGFRQLCQNDQIALLKSGSMEVVLVRMSRMFNTENN
TVFFDGKFAGTELFKSLACSDLIAAVFDFAHNLCALRLTEQQMAVFTALVLINADRPCLE
DRERVQKVRRDVELALSHIMHRDNQESLLHKLYQRVPVLKSLCTLHIEKLRWFRQLYPLT
VHSLFPPLYKELFGSDTDIQSLTTH
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgatgagcccgcatcgccggacccgaaccacgacaacactcagagaggaaat
ccagtgcacaagaaatcccatctgactcagattgaggtgatcccatgtaagatctgtgga
gacaagtcttcaggggttcattatggagtgatcacttgtgagggctgcaagggcttcttc
cgcagaagtcagtcctccagcgtgcagtactcgtgctccaggcagagcaactgccccatc
gaccgcgccagccgtaaccgctgccagagctgccgcctcaaaaaatgtgtcgctcagggg
atgagccgcgatgcggtgaagtttggccgcatgtccaagcgtcagagagactcgctgttt
gcagaagtcgagagacatcgacaacagcagcgtcttcaggccaactcagtccaagagcct
cagtctctcccagcctaccgatccggcaaagagcccagagaacagacatcacatctcatc
ccgcctctacctcaagcctacccttattctgttgagcctgaactgccaggctgcccacca
gaggtacatccatacctggagtgtcgcataggcgaggcccaggctcagagtctggcctac
agggtttcccacaggagaggtgagagcaacagcttgtcagcaggtagaggatttgactct
acaaggtctacaccagagactattctgaacatgagcggcagtgaaatggggtttcgtcct
tttgaccctgagagctcgttcttttcctatccgacctctctgcacatagaggagctctct
gcaagtatcgtacgttctcacagagagacgactcagtatcgaccggaggaactgcaggct
ctcagatggaaggtcttcagcagggaggagatccatgcttaccagagcaaatcggtggat
gagatgtggcagcactgtgcggtgaggttgaccgatgccgttcagtatgtggtggaattt
gctaaacgtatcccaggattccgtcagctttgtcagaatgatcaaattgctctcctcaag
agtgggtcaatggaagtggttctggttcggatgagtcggatgtttaacacagaaaacaac
acagtattttttgacggcaaatttgcaggaacagaacttttcaaatctctcgcgtgtagc
gatctaatagctgctgtatttgactttgctcacaatctgtgtgcgctgagactgactgaa
cagcagatggcagtgttcactgcactggtcctcatcaatgcagatcgaccatgtctggaa
gacagagaaagagtgcagaaagtaaggagagatgtggagcttgcccttagtcacatcatg
cacagagacaatcaggagagtctgctgcataagctgtatcaaagagtgccggtgttgaag
tctctgtgtacgctgcatattgagaaactgcgatggtttcggcagctttaccctctcacg
gtgcattccctcttccctccgctatacaaagagctgttcggctctgacacggatatacag
tccttgactactcactaa
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