Rhinichthys klamathensis goyatoka (western speckled dace): 130070731
Help
Entry
130070731 CDS
T09701
Symbol
tmc1
Name
(RefSeq) LOW QUALITY PROTEIN: transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rkg02000
]
130070731 (tmc1)
03037 Cilium and associated proteins [BR:
rkg03037
]
130070731 (tmc1)
Transporters [BR:
rkg02000
]
Other transporters
Pores ion channels [TC:
1
]
130070731 (tmc1)
Cilium and associated proteins [BR:
rkg03037
]
Other cilia and associated proteins
Stereociliary proteins
130070731 (tmc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Na_K-ATPase
COX16
Motif
Other DBs
NCBI-GeneID:
130070731
NCBI-ProteinID:
XP_056091204
LinkDB
All DBs
Position
Unknown
AA seq
1019 aa
AA seq
DB search
MLVKSELFMHGTHHLQVLFNQAMVQCYIIIIITLTHTHAHTQXRPLKRRMPRHKLIASES
DVSIEVEDEGKDNEFSLYYVEVEENFEGGKEKQVTRDGKRRRVRNSEVSRRASEKRTTEA
CNKRAEKKHDKRHKTARKEGEKHGRKQRRKNADAEEAEEEKFRKEKKNIKNERTKTLKLE
DEKEKDVKKKRKKHANEEDDAKHGKTKQKDCHDMPLKERKKKKKIKKPETISESESKSES
ESQSDSDLESKDNQAVGVLGSLTPEELEKLKEAVDERKKLIATLRGKPWPMRKKLVILRE
SQEFVEKYEGALGKGKGRKLYAYKVMMMKKWMKFQRDFENFKTACIPWEMKIKEIESHFG
SSVASYFIFLRWMYGINMILFGLTFGLVMVPEALMGKPYGSLPRKTVPRVEEASAMNFAV
LWDFGGYAKYSVLFYGYYNSQRAIGWLKFRMPLSYFLVGVGTVAYSYMVVIRTMARNANE
EGGGDDTSFNFSWKTFTSWDYLIGNPETADNKFASITTSFKETIVEEQESRKDDNIHLTR
FLRVLANFLVLCCLAGSGYLIYFVVRRSQKFALEGLEKYGWWERNEVNMVMSLLGMFCPM
LFDVISTLENYHPRIALQWQLGRIFALFLGNLYTFIIALMDAIQLKRAEEEIVKKNMTIW
QANLYNGTMPDNSTAPPITAHPADVPRGPCWETMVGQEFVRLIISDTMTTYITLLIGDFF
RAVLVRFLNNCWCWDLEFGFPSYSEFDVSGNVLGLIFNQGMIWMGAFYAPCLPALNLLRL
HVSMYLQCWAVMCCNVPQERVFKASGSNNFYMAMLLVILFLSTLPAIYTIVTIPPSFDCG
PFSGKNRMFDVIQETLETDFPAWFSKVFSYASNPGLVLPFLLLLVLAIYYLQSTSKTYKR
VNMELKKKLQTQNEENKKKNKLAALKAANELEQQRNNSAHDLGVNEESSSLDEAGHHRQA
GQNGRFIHPSQSQHTQNSGPPVTTTHTTTRTPASRGHTSSGHLPGHPHQPQKNSHSNKR
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgctagtaaaaagtgaactcttcatgcacggtactcatcacctccaggttctgttcaat
caggccatggtccaatgctacatcatcatcatcatcactctcacacacacgcacgcacac
acgcagtgaaggccactcaagaggaggatgccacggcataaactcatcgcatctgaaagt
gacgtgagcattgaggtggaggatgaagggaaggacaatgaattcagcctttactatgta
gaagtggaggaaaattttgagggaggtaaagagaagcaggtgacgcgagatggcaaacgg
aggagagtgagaaatagtgaagttagcagaagagcttcagagaagagaacaactgaggcg
tgcaataaaagagcagagaagaaacacgataaacggcacaaaacagcaaggaaagagggt
gaaaaacatggaagaaagcaaagaagaaagaatgcagatgcagaggaggctgaggaagaa
aaattcagaaaggagaaaaagaacattaaaaatgaaagaactaagacattgaagctggag
gatgagaaggaaaaagatgtgaagaaaaagagaaagaagcatgcaaatgaggaggacgat
gcaaagcatggaaagacaaaacaaaaagattgtcatgacatgcccttgaaggaaaggaaa
aagaaaaagaaaataaagaaaccagaaactatctcagagtctgagtctaaatctgagtca
gaatctcagtccgactctgacttagagtcaaaggataatcaggcagtgggagttttgggg
tctctgaccccagaggagctggaaaagttaaaagaagctgtggacgaaaggaaaaagcta
atcgccacactgagaggaaagccctggcccatgaggaaaaaactagttatccttagggag
tcacaggagtttgtggagaaatatgaaggggctctaggaaaaggcaaaggcaggaagctc
tatgcctacaaggtcatgatgatgaagaaatggatgaagtttcagcgtgactttgagaac
ttcaagactgcatgcatcccgtgggagatgaagataaaggaaatagaaagccattttggc
tcatcagttgcttcttacttcatatttctaaggtggatgtatggcatcaatatgatttta
tttggattgacgtttgggctggtgatggttccagaggctcttatggggaaaccgtatggc
agtttacccagaaagacagtgcccagagtggaagaggccagtgccatgaattttgcagtc
ttatgggatttcgggggctatgctaaatactctgtcctcttctatggctactacaacagc
cagcgggccattgggtggctcaagttccgcatgcccctctcctacttcctggtgggagtg
ggcacagtggcatatagctacatggtggtaatcaggactatggcccgcaatgcaaatgaa
gaaggtggcggagatgacaccagctttaatttcagttggaagacatttactagctgggat
tacctcattggaaatcctgagacagcagacaacaagtttgcctccatcaccacaagcttt
aaggagaccattgtggaggagcaagagagcagaaaagatgataacatccacctgacaaga
ttccttagagtgctggccaacttcctggtgctctgctgtctggcagggagtgggtacttg
atctactttgtagtacgcaggtctcagaagttcgctctggagggactggagaaatacggc
tggtgggagaggaatgaggtgaacatggtgatgtctcttttgggaatgttctgtccgatg
ctgtttgatgtaatcagcactttagagaactatcatccacgcatcgccctccagtggcag
ctgggacgcatattcgcccttttcttggggaacctctacacattcattatcgctctcatg
gatgccatccaactaaagagggcagaagaggagattgtgaagaagaatatgacaatatgg
caggctaacctgtacaacgggactatgccagacaactcgactgctcctccgatcacagcg
caccctgctgatgttccaagagggccttgctgggagacaatggtgggacaggagtttgtt
cgtctcatcatttctgacacaatgacgacttacatcactctgcttattggggatttcttc
cgtgccgtactggtgcgattcctaaacaattgctggtgctgggatttggagtttggcttt
ccgtcctattcagagtttgacgtcagtgggaatgttctggggctgatcttcaaccaggga
atgatctggatgggggcgttctacgctccatgtcttccagcattaaatcttctacggctt
cacgtgtccatgtacctgcagtgttgggcggtgatgtgctgtaatgtgcctcaggaacgg
gtcttcaaagcttcaggctccaataacttctacatggccatgctgctggtcatcctcttc
ctttctacattgcctgctatatacaccattgtcaccattcccccctccttcgactgcgga
cccttcagtgggaaaaaccgcatgtttgacgtgattcaggagaccctggagacagacttc
cctgcctggttcagtaaagtgttcagctatgcctcgaaccccggactggtgcttcccttt
cttctgctcttggttcttgcaatatattatctgcagtctacttctaaaacatacaaaagg
gtaaacatggagctgaaaaagaaacttcaaacacaaaatgaggaaaacaagaaaaagaac
aaacttgcagccttaaaggcagccaatgaactggagcaacaacgcaacaacagcgcccac
gatttgggagtgaatgaagaaagcagcagcctagatgaagcagggcatcacagacaagct
gggcagaacggtcgctttattcacccatcacagagtcagcatactcaaaactctggacct
cccgtcaccacgacccacacaactactagaacccctgcatcccggggccacacatcatct
ggacatcttccaggtcacccacatcagccacagaaaaactctcactcaaacaagagataa
DBGET
integrated database retrieval system
