Rhinichthys klamathensis goyatoka (western speckled dace): 130070928
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Entry
130070928 CDS
T09701
Symbol
chd7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rkg03036
]
130070928 (chd7)
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
130070928 (chd7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HTH_CHD1_Hrp3
HDA2-3
Myb_DNA-bind_7
MUN
Motif
Other DBs
NCBI-GeneID:
130070928
NCBI-ProteinID:
XP_056091487
LinkDB
All DBs
Position
Unknown
AA seq
3138 aa
AA seq
DB search
MADPGMINLFGDDGNLFSDELEGLGDCGYPQGQANPMSQQMPHEHQGYGQLPSSLHLSSP
AVPGQAKLGHHFDHFNQYEQPKMHPMDQQGGRLMGNGPVNGMSSPHSRYHGAPPSAGGTA
GHHVYPGAQGDGRSQSFPDGGNVWGAQTMQVPEQTRPPFQQQPPQASSHQHGPAGPQGHT
HQMGPFIGRGDYAIQGHNQTQTPPRMNHFPQGLPQEANHFMGHMGITQNPGMSGPPMRHP
AQPPQQHQQPNQQFLHRPGQGPGHPESVASHNPQFPQSPSRQQQVLGGRPHQTMGFNMHN
QQVPSNTVNSSGQYPPYPSYGNLNQGLANTSGMSPNLSLTTSSNSNPNAPVTQVQRYPAP
TGPQRYPTAGAQQGPMHQQPIHVNQINTQPMHQAQNQSTAQQKLQQQHLQTPPQGSYASP
PSMSPMRNLATPAGTPPPQQGRPPSAGLGTDVGSYPVVPHQSQGPMAHAQRGAGPMNAAQ
QHPHQQLPSHPSHPHPPPTQMYAALSPNHRATSAQGRPPAGLGANHTEPLGPQDQRMLAQ
AQRQQLQTPPLPFQQQQLQQVHTPPSIPPSQTHLGAHHQNSPPSQQAWAPLRQSPPPMLK
VPHMQHSPSDLSLEITSSKAPVLGPNLQPASCDIQQTESELKPKKKKKKKAKVSDGQEGN
DISGEAGGEAAALINKGDRLMTPVEQSAIEKKSKKKPKEKDPKEPKEPKTPKTPKTPKTP
KTPKEPKEPKEKKVKTATPKPKSSKKPSAKKSDFESSNSTKKEAKRKREPSVTSDVEKTP
PHSPEEEEDDGVQKRRSSRQVKRKRYTEDLEFRISDDDGDDSPGPKSPTTSEQQELPDAE
GPVVEKIMGMRIGKKELSSGEEVEVEEFYVKFKGFSYLHCRWADIEELEKDKRIQQKVKR
FKAKQALSNFLSEMDDEPFNPDYVEVDRVLDVSESTDENGEPVTLYLVKWCSLPYEDSTW
ELKADIDQGKIEEFERVMAREPEPKRVERPPTSDWQKSESSREYKNGNALREYQLEGVNW
LLFNWYNTRNCILADEMGLGKTIQSITFLYEIYLKGIHGPYLVIAPLSTIPNWEREFRTW
TELNVVVYHGSQASRKTIQAYEMYYRDTQGRVIKGAYKFHAIITTFEMILTDCPELRSVP
WRCVIIDEAHRLKNRNCKLLEGLKMMDMEHKVLLTGTPLQNTVEELFSLLNFLEPDRFPS
ESTFMLEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNVQKKYY
RAILEKNFAFLSKSGGGGSGGGGGGSSVPNLLNTMMELRKCCNHPYLINGAEEKIMEEFR
ESHPLDYPEFHLQAMVQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRR
YPYERIDGRVRGNLRQAAIDRFSRPESDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNP
QNDLQAQARCHRIGQSKAVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENAAN
GVQQLSKKEVEDLLRKGAYGALMDEEDEGSKFCEEDIDQILQRRTQTITIESEGKGSTFA
KASFVASGNRTDISLEDPDFWQKWAKKAELDLDVINGRNNLVIDTPRVRKQTRHYSSMKE
DDLMEYSELESDSEDKPLQKPRRPQDRTQGYPRSECFRVEKNLLVYGWGRWGDILSHGRF
KRPLRERDVETICRALLAYCLLNYRGDENIKSFIWDLITPTEDGQSRTLTNHSGLSAPVP
RGRKGKKGKPQAAQTHMPQADWLADCNPDILLQEDSYKRHLKHHCNKVLLRVRMLYYLRQ
EVIGDQADKILEGTDSSELDIWIPQPFQADVPTDWWDLDADKSLLIGVYKHGYEKYNSMR
ADPTLCFLERVGMPDAKAIAAEQRGADMMADGVEGEDEDPEYKPLRMPFKDDLDDFTNSP
LDDKDEGMDGEAGEGPKPGENGKAGNLYWPPASALTARLRRLITAYQRTHKREQLRQEAM
TKPDRRRRRPRDDILAMVTEGGAYAPEGAVAFMAEGGPFMAKGSPYIPDSAALLADGAAY
FKERRQRWTRREEADFYRVVSTFGVVYDVHRQCFDWSQFRAFARLDKKTDESLEKYYYSF
VAMCKRVCRMQIKSETELPDPTLIIDPITEERASRTLYRIELLRRIREQVLPHPLLEERL
SLCQPSPDLPAWWEPGRHDRDLLRGAAKHGVSRTDYHILNDPELSFLEAHRKFTQGKGAE
MPIMSDPLTPLTLLKDDEVKEEHGDMMVPKVENSNIEVVKGEISEALSPKKEVKEEEEAN
DLSLKHEPKEEEMEEKDAMEVKTKVELDCPVDGMAEEKPIDQESTDTLPTPEDKIAQDES
EPPLNTETKVPIDKISEEDEEEKMDEDDKSEKSSQAEVGAASESKNFDEESNASLSTARD
ETRDCFSVDDVEPPASQMFSERSLFSFWPKDRVMINRMDNICEAVMKGKWPFNRRQFFDF
PGLLPGYSSMTTDSPLQRRSLGDLSMVGQTSYSGSEDLTMSPQVNKDETLSLSVPRQRRR
RRRKVEIEAERAAKRRNLMEMVAQLRESHATEGQTQAIDLTKALQGVSSSSSSSAFPGAM
ASSAALKAQMELLQAGASSRPRANGSLHDTELPNRRKRGRRKNVEGLELLFMGNKRGPLN
VENSDGTKAFVDGRTHRPMSSPAQKAPGEGLEEGSHLQGEDGPSTKDLREWLRQHPTYTM
DVPGYVPKNEDHLLSQFAKPKQKRHRCRNPNKIDINTLTGEERVPVVNIRNGRKMGGAMA
PPMKDLPRWLIENPEFAIAPDWTDIVKQSGFLPESMFDRLLTGPVVREEGVRRRGRRPKS
EIAKATAAAQAAAAAAASTSGVNPLLMNGLFGSMDLTSLQGLQNLQSLQLAAGLMGFPAA
LGGGADGKHAAAMLPLMLPGMGGLPNMFSLGGLFGGSLAAAATATNGASGTEQAESEEIP
NLKTDEETKEEGDEKEKAEKLTETESAEATSDAASLNAAAAAAAAAGMSTSPLAFNPFLL
STMAPGLFYPSMFLPASLGGLGLPGFPQASLADLQSAVSGALGAAGEDKESAKGPSTNQD
QNASAADVETADNTLEDSDSEESQNKTADSSVLDDDLAGTVEEMDSMEGGMDEDDDDDDD
DDDDEDDDEPADEDDKSD
NT seq
9417 nt
NT seq
+upstream
nt +downstream
nt
atggctgacccaggcatgatcaacctctttggagacgatgggaatctgttctctgatgag
ttggagggcctgggggactgtggctacccccaaggtcaggcaaatcccatgagtcaacag
atgccccatgagcaccaaggctacggacagctcccctcttctcttcacctctcttcacct
gctgtccctggacaggccaagcttggccaccattttgaccactttaatcagtatgagcag
cccaaaatgcatccaatggaccagcaggggggccggttgatggggaatgggccagtaaat
ggcatgtcttcccctcattcccgctatcatggtgctccgccaagtgcgggagggacagca
gggcatcatgtctacccgggtgcacaaggagatgggcggagccaatcattcccagatggt
ggaaatgtgtggggtgctcaaacgatgcaggtgcccgaacaaacgagaccacctttccag
cagcaacctccacaagcctcctctcatcagcacggccctgctggaccacaaggacacacc
caccaaatgggcccttttattggccgtggtgactatgccattcagggtcacaaccagacc
caaacacctcccagaatgaaccactttccacaaggcctccctcaggaagccaatcatttc
atgggtcacatgggtataactcagaatcccggcatgtcggggccccccatgcgtcaccca
gcacagcctcctcaacagcatcagcaacccaatcagcagttcctccacagacccggccag
ggtccgggtcatccggagtccgtcgccagccataacccccagttcccacaaagcccttca
cggcagcagcaggtcttgggtggaagaccgcaccaaaccatgggatttaacatgcacaac
cagcaagtcccttccaacactgtaaacagctcagggcagtaccctccctatccttcgtac
ggcaaccttaatcagggattagccaacacttcaggaatgagtcccaacttgagccttacc
accagcagcaacagcaaccctaatgctcctgtgacccaggtgcaacgctaccctgcccca
acggggccccagcgctaccccacagctggggctcaacagggaccaatgcaccagcagccc
attcatgtgaaccaaatcaacacccagcctatgcatcaagctcagaaccagtctacagcc
cagcagaagctgcagcaacagcatctacagactccacctcagggatcatacgcctcccct
ccttccatgtcgcccatgaggaacctggccacacctgcaggcaccccacctccccagcag
ggccgcccacccagtgctggtttgggaaccgatgttggcagctaccctgtcgtgccacat
caatcgcaaggcccaatggctcatgcccagagaggagccggcccgatgaatgcagcgcag
caacatccccaccaacagctaccatcacatccctcacacccacatcctcctccaacccag
atgtatgctgctttgtcacccaatcacagggccacgagcgctcaaggaagacctccagca
ggactgggtgcaaaccacacagagccactgggcccacaggaccagaggatgcttgctcaa
gcacagcgccagcagctgcagacgcccccattgcctttccagcagcaacagctgcagcag
gtgcacacccctccctctattcctccatcacagacacacctaggtgcacaccaccagaac
tcccctccatctcagcaggcatgggcacctcttcgccagtcacctccacccatgctgaaa
gtgcctcacatgcagcattctccatcagacctttccctggagataacatccagtaaggca
cctgtcttgggcccaaacctccaaccagccagctgtgacatacagcagacggagagcgag
ctcaagccaaaaaagaagaaaaagaagaaagccaaggtaagtgacggccaggagggtaac
gacatcagtggtgaggctggtggagaggcagctgctctgattaacaagggagacaggctt
atgactcccgtggaacagtctgccattgaaaagaagagcaaaaagaagccaaaggagaag
gatcccaaggaaccgaaagagcccaagactcccaaaaccccgaagactcccaaaacaccc
aagacacccaaagaacccaaggaaccgaaggagaaaaaagtgaagactgccaccccgaag
cctaaaagctccaaaaagcccagtgcaaaaaaatctgacttcgagtccagtaacagcacc
aagaaagaggcaaagcgcaagagagagccctcagtcacatctgatgtggagaaaacaccg
ccacattcaccagaggaggaggaagatgatggtgttcagaagaggcgatctagccggcag
gtaaagaggaaacgctatactgaggacctggagttcagaatttctgatgatgatggagat
gattccccaggaccaaagtctccaacaacatctgagcagcaggagttgccagatgcagag
ggccctgtggtggagaaaatcatggggatgcgcattggaaagaaagagttgtcatctggt
gaagaggtggaagttgaggagttttatgtcaaattcaaaggcttctcctacctgcattgt
cgctgggcagacatcgaagagctggagaaggataagagaatccagcagaaggttaagagg
ttcaaggccaagcaagccctcagtaacttccttagtgagatggatgatgagcccttcaac
ccagattatgtggaggtggacagggttctggatgtgtctgaaagcacagatgaaaatgga
gagcctgtaactttgtacctggtaaagtggtgctccttgccttacgaggacagcacgtgg
gagttaaaagctgacattgaccaagggaagattgaggagttcgagcgagtgatggcacgt
gagccagagccaaagcgtgtggagcgacctcctaccagtgactggcagaaatccgagagt
tccagagaatataaaaacggcaatgcactcagggaataccagctggagggagtcaactgg
ctgctcttcaactggtacaacacacgaaactgtattttagctgatgaaatgggccttggc
aaaacaatccagtccatcacattcctctatgagatatacctgaagggaatccacggtcct
tacttggtgattgctcctctttccaccattccaaactgggagagggagttcaggacatgg
actgagctaaacgtagtggtctatcatggtagccaggcaagccgaaagactattcaggct
tatgagatgtactacagagacacacagggtcgtgtaataaagggagcctacaaattccat
gcaatcatcaccacgtttgagatgatcctgacagactgccccgagctacggagtgtgccg
tggcgctgtgtgatcattgatgaggctcatagactaaagaacaggaactgcaagcttctt
gagggcctaaagatgatggacatggaacacaaagtcctcctgactgggaccccactgcaa
aacacagtggaggagctcttcagtctccttaatttcctggagccagataggtttccttca
gagtccaccttcatgctggagtttggcgatcttaaaacagaagagcaggtgcaaaagctg
caggccattttgaagcccatgatgctgcgccgactgaaggaggatgtagagaagaatctt
gcaccgaaagaggagaccatcattgaagtggaactgaccaatgtgcagaagaaatactac
cgtgccatcttggagaagaactttgccttcctttccaagagtggaggaggtggcagtgga
ggtggaggaggaggatccagtgttcccaacttgctgaacaccatgatggagctgaggaag
tgctgtaatcacccctacctcattaatggagctgaggagaagataatggaggagttcagg
gagagtcaccccttagattacccagagttccacctccaggccatggtccaggctgcagga
aaactggtgctgatcgacaagctgctccccaaactgaaggctgggggtcaccgtgtgctc
atcttttcccagatggtgcgctgtctggacatcctggaggactacctcatccagagacgg
tatccatatgagcgtatagatggcagagttcgaggaaatctacgccaggcagctattgac
cgcttctcacgaccagaatctgaccgtttcgtgttcctgctatgcaccagggctggaggc
ttgggtattaacttaactgcagctgatacgtgcattatatttgactccgactggaaccct
cagaatgacttacaggctcaggctcgatgccacaggataggacagagcaaggctgtgaag
atttaccgcctgatcaccagaaactcctacgaaagagaaatgtttgacaaggccagtctg
aagttaggactggacaaggcggtgcttcagtccatgagcgggagggagaatgctgccaac
ggggttcagcagctctctaaaaaggaggtagaggacctcctacgtaaaggagcttatgga
gctctaatggatgaagaggacgagggatccaagttctgtgaagaagacattgatcagatt
ttgcagagacgcacacagaccattacaattgaatcagaaggcaaaggctcaacatttgct
aaggcaagttttgtggcctctgggaacagaactgacatttctctggaggacccagatttc
tggcagaaatgggcaaagaaagcagagctggacctggatgtgatcaatggcaggaataat
ctggtgattgacactcctcgggtccggaagcagactcgtcactacagttctatgaaggag
gatgatttgatggagtattcagaacttgagagtgactctgaagacaagccccttcagaaa
ccgcggaggccccaggaccgaacccaggggtacccccgcagtgagtgctttagagtggag
aagaaccttctggtgtatggctggggccgctggggtgacatcctgtcccatggacgcttt
aagcgtccgctaagggagcgagacgtagagaccatctgccgagccctcctggcctactgt
ctgctcaactaccgtggagacgagaacatcaagagcttcatttgggaccttataacccct
accgaggatggccagagccgcacactgaccaaccactctggtctgtctgctcctgtgccc
cggggccgtaaagggaagaaggggaagccacaggctgctcaaactcacatgccacaggct
gactggcttgctgactgtaatcctgacatcctccttcaagaggatagttataagagacac
ctgaaacaccactgtaacaaagtgctgctgcgggtccgcatgctgtactatctgcgacaa
gaagtcataggagaccaggcagacaaaatcctggagggaacggattcaagtgagttggat
atctggatcccacaacccttccaagccgacgtacccactgattggtgggatctcgatgct
gacaagtccctcctcatcggcgtctataagcatggctatgagaagtataactcaatgcgt
gctgaccccaccctgtgtttcctggagagggtgggcatgcctgatgccaaggccatcgct
gccgagcagaggggagcggacatgatggcagatggtgtcgagggagaggatgaagaccca
gagtacaagccactccggatgcctttcaaagatgatctggatgattttacaaactctcca
ctggatgataaagatgaagggatggatggtgaggctggagaaggtcctaagcctggtgag
aatgggaaggcaggcaatctgtactggcctccagcctcggctcttaccgcccgattgcgc
cgcctcatcacggcctatcagcgcactcacaagcgtgagcaactaaggcaggaagctatg
accaaacctgaccggcgccggcgccgcccgcgagatgacatccttgccatggtaacagag
ggaggagcttatgctccagagggagcagtggctttcatggctgaaggagggcccttcatg
gccaagggatcaccttacatccctgacagcgccgccctgctggctgatggagcagcttat
ttcaaagagcgacggcagagatggacaaggcgtgaagaggctgatttctaccgggtggtg
tccacattcggtgtggtttatgacgtgcacagacagtgctttgactggtcccaattccgt
gcttttgctcgtctggacaagaagactgatgagagcctggaaaaatattactactctttt
gtggctatgtgcaagcgtgtgtgccggatgcagattaaatcagagacagaattgccagac
cccactctcatcattgaccccattacagaggagcgggcttcacggacgctctatcgtatc
gagctgctgcggcggatcagggagcaggtgttgccgcaccctctgctggaggagaggttg
agtctgtgccaacccagccccgacctccctgcctggtgggagcccggacgccatgatcga
gacctccttcggggtgctgcaaagcatggtgtcagccgcactgactaccacatcctcaac
gaccctgagctgagcttcttggaggcccatagaaagttcacacagggcaagggtgctgaa
atgcccatcatgtctgatcccctcacccctctgaccctgctcaaagatgatgaggtgaag
gaagagcatggagatatgatggtgcccaaagtggagaacagtaacatagaggtggtcaaa
ggagagatatctgaagccctgtctcctaaaaaggaagtgaaggaagaagaggaagcaaat
gatttgagtcttaagcacgagcccaaggaggaggagatggaggagaaagatgcaatggag
gttaagaccaaggtagagctggattgtcctgtggatggtatggctgaggagaagcccata
gaccaggagtccacagatacactccctacccctgaggataaaatcgctcaggatgagagt
gagcctcccttgaacactgagactaaagtacctattgacaaaatctctgaagaagacgag
gaagaaaaaatggatgaggatgacaaatcagaaaaatcttcacaagctgaagttggagcc
gcctccgagagtaagaattttgacgaggagagtaacgcctccttgagcactgctcgcgat
gagaccagggactgctttagtgttgatgacgtcgagccgccagcctctcagatgttcagt
gaacgctcactgttctctttctggcccaaggacagggtaatgatcaatcgtatggacaac
atctgtgaagcggtcatgaagggcaagtggcctttcaacaggaggcagttctttgacttc
ccaggcctgttgcctggctacagctccatgacaacggacagccccctgcagaggcggagt
cttggtgatctctcaatggtgggtcagaccagctatagtggcagtgaggacctcaccatg
tcaccgcaggtcaacaaggatgaaactttaagcctgtcagtacctcgacagcgcagacgc
aggaggaggaaggtggagattgaggcagagcgtgctgccaagcgcaggaacctgatggag
atggtagcacagctacgagagtcccatgccacagaaggccagacacaggccatagacctg
accaaagccctgcaaggcgtgtcgtcctcttcttcctcctctgccttccctggagccatg
gcctcctccgcagccctgaaagcacagatggagctgctgcaagcaggcgcttcctccaga
ccaagggccaacggctctctacatgacactgaactccccaaccggagaaaaagaggtcgc
aggaaaaatgtggaggggttggaactgctctttatgggaaacaagagaggacctctcaat
gtggaaaattccgatgggaccaaagcttttgtagatgggcggacacacagacccatgtca
tctcctgcacagaaagcccctggtgaaggcctagaagagggaagccatcttcaaggagaa
gatggtcccagcactaaggacctacgggaatggctgagacagcatcccacctacactatg
gatgtgcctggatacgtaccaaagaatgaggaccacctcctctcccagttcgccaagccc
aaacagaaaagacacagatgccgcaatcccaacaagattgacattaacacgctgaccgga
gaggagagagtccccgttgttaacattagaaatggaagaaagatgggaggagccatggcc
cctccaatgaaggatttaccacgctggctgattgaaaatccagaatttgccatcgcccca
gactggacagatattgtgaagcaatcgggctttctcccagagtccatgtttgaccgactc
ctgactgggccggtggtcagagaggagggcgtgcgccgcagaggcagacgtcccaaatct
gaaatcgccaaggcgacggcagcagcgcaggcagcggccgcagcagcggcttcaacatct
ggtgttaatcctttgctgatgaatggactgtttggcagtatggacctgaccagtctacag
ggcctgcagaacctccagagccttcagctggcagctggcctcatgggctttcccgctgct
cttggagggggagcggacggcaagcacgccgcggccatgctgcctctcatgcttcctggt
atgggcggcctccccaacatgttcagtctagggggtctgttcggaggaagtctggctgca
gctgcgactgcaaccaacggtgcgtctggtacagaacaggccgaatctgaggagattccc
aacctgaagacggacgaggagaccaaggaggaaggagatgagaaggaaaaagcagagaaa
ctgactgaaacagagtctgccgaggctaccagtgacgctgcttcgctgaatgctgctgct
gctgcggccgctgctgccggcatgtctactagcccgctggccttcaaccctttcttgctg
tccaccatggccccaggccttttctacccatccatgtttttacccgccagccttggcggc
ctgggcctgccaggcttcccccaagcttctcttgctgacctccagagtgctgtgtctggg
gccttgggggctgccggtgaggacaaggagtccgccaaagggcccagcacaaatcaggac
cagaacgcctctgcggctgatgttgaaactgctgacaacacacttgaagacagtgactca
gaggagagccagaacaagactgctgattcatcagtactagatgatgacctggcagggaca
gtcgaggaaatggactccatggagggtggaatggacgaggacgacgacgacgatgatgat
gatgatgatgatgaggacgatgacgaacctgctgatgaggatgacaaaagtgactga
DBGET
integrated database retrieval system
