Rhinichthys klamathensis goyatoka (western speckled dace): 130071017
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Entry
130071017 CDS
T09701
Symbol
mmp11b
Name
(RefSeq) stromelysin-3
KO
K07993
matrix metalloproteinase-11 (stromelysin 3) [EC:3.4.24.-]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rkg01002
]
130071017 (mmp11b)
Peptidases and inhibitors [BR:
rkg01002
]
Metallo peptidases
Family M10
130071017 (mmp11b)
BRITE hierarchy
Motif
Pfam:
Peptidase_M10
Hemopexin
Reprolysin_4
DUF4953
Reprolysin_3
Reprolysin_5
Peptidase_M43
Peptidase_M54
Motif
Other DBs
NCBI-GeneID:
130071017
NCBI-ProteinID:
XP_056091598
LinkDB
All DBs
Position
Unknown
AA seq
518 aa
AA seq
DB search
MQVVRAALNHSRMMRSAQLVAAVLYCSVCIHSLPVPDGNSYRYNKPAADWPQKTHHHHGL
KKRNQLHYVQDTLSEDSGNKRVHPHSALPKNDTEFWNRPRCGVPDYPSEKGGNALHYSTH
KVGLLGSRHRRKRFDLFGGRWDKTDLTYKIMRTPWQMSLEKVREVLREALRAWSDVTPLT
FTEVVSGRADIMIDFNRYWHGDNLPFDGPGGILAHAFFPRTYREGDIHFDYDESWTVGNS
MGTDLLQVAAHEIGHVLGLQHSMELGAVMSPFYTFSYPLQLSEDDKRGIQSLYGSKHSDD
RRKKEERPPKVTETNEIESTVPDACQTNFDAVSMIRGELFFFKSGYVWRIRDGTLQAGYP
ALASRHWRGIPGNIDAAFEDKAGNIWFFQGQSYWVFDAERQITGPDSVRRLGLTVNDIQA
ALMWGEDKAQKIYFFKKGSYWRFNLKENRVDSIHPRSMTDWRGIPSDIDAAFQDRFGFAH
FLRGKQYWKFDPVEVRVLEGYPRYIGMDFFRCSAALYQ
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtggtgcgtgcggctctgaatcacagcaggatgatgcgatctgcacagcttgtc
gctgcagtcttatactgttcagtgtgcattcattctctaccggttccagacgggaacagc
tacaggtacaacaaacctgctgcggattggcctcaaaagacccatcatcaccatggcctc
aaaaagagaaaccaacttcattatgtccaggataccctgagtgaagactctggcaataag
agagtgcacccacactcggctcttcccaaaaatgacactgagttctggaacaggcctcgc
tgtggagtcccagactacccctcagagaagggagggaacgcccttcattactcaacccac
aaagtaggtttgcttgggagccgtcatcgtcgaaaacgctttgatttgttcggaggacgc
tgggacaaaacagacctcacatacaagatcatgcggaccccttggcagatgagtttagag
aaagtcagagaagtactacgggaggcactgcgggcctggagtgacgtcacccctctcacc
tttactgaggtcgtcagcggaagggcggatatcatgatcgactttaacaggtactggcat
ggagacaatcttccttttgatggtccaggaggaattctggctcatgccttctttccccga
acgtaccgggagggagacattcactttgactatgatgagtcttggacagtgggcaacagt
atgggtactgatctcctccaggtggctgctcatgagattggtcacgttttgggattgcag
cactccatggaactaggcgcggtgatgtctcctttctacaccttctcctacccgctccaa
ctgagtgaagatgacaagcgtggcatacagtccctctatggatccaaacattcagatgat
agaaggaagaaggaagagagacctcccaaagtcacagagaccaatgagattgaaagtaca
gtgcctgatgcttgccaaaccaactttgatgctgtatccatgatccgaggcgagctgttt
ttctttaagtcgggttatgtatggcggatccgtgatggtacgctccaggctggatatcct
gcactggcatccaggcactggagaggaatcccaggcaacattgatgctgcttttgaggac
aaggctggaaatatctggtttttccaaggccagagttactgggtgtttgacgcagagcgg
cagatcacagggccagactctgtacgccgacttggtctaacagtgaacgacatccaggca
gcccttatgtggggggaagataaggcccagaagatctacttcttcaaaaaaggaagctac
tggcgattcaacctgaaggaaaaccgtgtagacagcatccaccctcgcagcatgacagac
tggagaggcatacctagtgacattgatgctgctttccaggaccgattcggcttcgcccat
ttcttgagagggaagcagtactggaagtttgacccagtggaagtgagggttctggaggga
tacccacgatatattggcatggatttcttccgttgttctgcagccctgtatcaatga
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integrated database retrieval system
