Rhinichthys klamathensis goyatoka (western speckled dace): 130071095
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Entry
130071095 CDS
T09701
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130071095
04121 Ubiquitin system [BR:
rkg04121
]
130071095
Transcription factors [BR:
rkg03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
130071095
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
130071095
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-BED
Dimer_Tnp_hAT
DBD_Tnp_Hermes
Arteri_GP4
DUF2511
Phasin
Motif
Other DBs
NCBI-GeneID:
130071095
NCBI-ProteinID:
XP_056091689
LinkDB
All DBs
Position
Unknown
AA seq
591 aa
AA seq
DB search
MKRSRRSVAWDHFDLKSEIVHCKHCDAVYKYNTSTTQMMYHLNKVHPSLVNVGGGASCSQ
SQPSIKSALARTRSCDAQRAEKITQGICKFIEMDILPLSIVEGNGFRELIHFLEPAYQIP
SRRTITRLVETRYEERKQQLLKELSKAERVALTTDCWTALTTESYITITCHYISDDWQMI
SAVLLTESLPGRHTADHLAEKMNGAVEQWGLEGRVIACVHDNAANIVAANSHTRVPWISV
ACFAHTLQLAINDGFALYLYRVISAASKLVSHFNHSTAATKALQKKQEQMGLATHRLTQS
CKTRWNSVCEMFDRLVEQRWAVVAVLSDRTVTKLQDARILELKDEYWQLMEDTQPVLSAL
KCATTVMSAEKDVSISNTYPVTFGLINIHLMRSEGDGPRLIEFKTKIESDEFVSFAPMIS
SMLDPRHKHLGFLTPAQRLAANVKLVELGEAVGSQGTDRAAIPQAGAVEAALSDTDEGSA
NTEVTTSQSSAMAQLLGDHYSRPTTTQCEASIEAELQNFLRETPPPLNCTPTDWWKVNEL
RFPGLAKLARSYPVHPGNISPRRAGVFGCRTDEQMRSRFKNAGSQLQVPLL
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggtcacggcgaagtgtggcgtgggaccattttgatttaaaaagcgaaatagtt
cactgcaaacattgcgatgctgtgtataagtacaacacgtccacgactcaaatgatgtac
cacttaaacaaagtgcatccgtccctggttaatgtcggtggcggtgcatcctgctctcag
tctcaacctagcatcaagtcggcgttagctcggactcggagctgtgatgcacaacgagca
gagaaaattacccaagggatctgcaagttcattgagatggatattctgcccttaagtatt
gttgagggcaatggttttcgagaactgatacattttttagaaccagcatatcaaattcca
tcacgacgtaccatcaccagactggtagaaactcgctacgaagaacgaaagcagcagctg
ttaaaagaattgagcaaagctgagagagttgctctaactacagactgctggaccgcttta
acaactgagagctacatcaccataacctgccactacattagtgatgactggcaaatgatc
tcagcggtcctgctcacagaaagtctgccaggccggcatacagctgaccacctcgctgag
aaaatgaatggagcggtagagcagtggggacttgaaggccgagttattgcatgcgttcat
gacaacgcggccaatattgtagctgccaacagtcacaccagagtgccctggatttccgtt
gcctgctttgcacacaccctccagttggccataaatgacggatttgcactgtatctttat
cgggtaatatcagcggctagtaaactcgttagccactttaatcacagcactgcagcaacc
aaagcgctgcaaaagaaacaggagcaaatgggcctcgcaactcaccggcttacccagtcg
tgtaaaacacggtggaactccgtgtgcgagatgtttgatcggctggtggagcagcggtgg
gctgttgttgctgtgctgtcggaccgaaccgtgaccaagcttcaagatgccaggatcctg
gagttgaaggacgagtactggcagctgatggaggacacacagcccgtactgtcagcactt
aaatgtgccaccacggttatgtctgcagagaaagacgtctccatctcgaacacttatccc
gtcaccttcggcctcatcaatatccacctcatgcgcagtgaaggagacgggcccagactc
atcgagttcaagacaaaaattgagtctgatgagtttgtgtcattcgcccccatgatctca
tcaatgctggaccctcgtcacaagcacctgggctttcttacaccagcacagagactggct
gctaatgtgaaactggttgaactgggagaggcggtggggagtcaggggaccgatagggcg
gctatcccacaggctggggcggtcgaggctgcgttgtctgacacggacgaggggagcgct
aacactgaagtcacgacctcccagtcatctgctatggcacaactccttggggatcactat
agtaggcctactactactcaatgcgaggcaagcatcgaagcagaacttcagaactttctg
agggagactcccccaccgctgaattgcacacctacagactggtggaaagtgaacgaatta
agattccccgggctggccaagttagcgcggagctaccctgtgcatcccggcaacatcagt
ccccgcagagcgggtgttttcggctgcaggactgacgaacaaatgaggtctcggtttaag
aacgccggctcgcagttgcaggttccgctgctttag
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