Rhinichthys klamathensis goyatoka (western speckled dace): 130071142
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Entry
130071142 CDS
T09701
Symbol
caprin2
Name
(RefSeq) caprin-2 isoform X1
KO
K18744
caprin-2
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rkg03019
]
130071142 (caprin2)
Messenger RNA biogenesis [BR:
rkg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
130071142 (caprin2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Caprin-1_dimer
C1q
Caprin-1_C
DUF4094
BclA_C
DUF3671
Motif
Other DBs
NCBI-GeneID:
130071142
NCBI-ProteinID:
XP_056091749
LinkDB
All DBs
Position
Unknown
AA seq
943 aa
AA seq
DB search
MRETKIMVQLSPSRTIETLTPSELTVEKEDGLDSPKSGSPRVLTALQLALNPAATTYYGY
EKYIEDGLICLKHKIRNIEKKKLKLESYNERLEKGEKLNKDQLDAVGKYEEVIHNLTFAK
ELQKTISALTQDLLKAQRKVVRQEKIMRIEQERKRLSLILQVQYVLHSLQREDVRRNFCN
ARQHSRHLTTKDTQSLLDLASLLGCKRDHKMSLEDQMEQAAIVYSELLEGKERPVAGSTY
KHMKEKLLQLVDCGFFDHLPLPKVDIQEKTEAVKADPPSRPCNLSTLVKLSSKEVPPKEF
LNRRYLPETNVAERRPDEKASPRNWKDDFLAMKEREPPDSWEMELSDPPVSSQSPIQKPW
KGAAGLIPKTTDILKRPTVDPKEKRQKKTKVEQDSKSTPVAVEVFSSPSPLPQDPVQRKQ
QLETLMDQISGSFSFMQESHLDGETSPVNGRAKRCRPSPGCSTPLAQRELPKSPSDSLPP
SQLSTPLQILLSGEGKGCLSNGDHSITSSDLDLHHEDKPHKQSEGFTSPPLYRRGSSISV
PLENQGTVQAGKQMLCNGVSTSVVAQTFTTPPSHRSISAENNFHNIHSVFNVASLPISES
SGMKSDESGFSESMHLSYTSAKTQSYSTASTQTPPELNLPEDDLQIEGQYQLECPVSTGG
HVFSTPQPQSRLSQSCYPRGTARGMTRAGRGLGHSYRSPGGYRGGYEAYRVNVRSPGGGF
ISQTHRDPGSAFYVSRENGYQQSFKRGGGTATQRSNAGWSDSSQVSSPDREGAYPLDSGI
SDTLSIPPMEVPITPQGPHTMMPVHVYPLNQLRVAFSAARAANFAPGTLDQPIAFELLHT
NLGEMFDTTSGRFTCPAAGTYVFIFHILKLAISVPLYINLMRNEEVMVSAYANDGAPDHE
TASNHAVLQLFQGDQVWLRLHRGAIYGSSWKYSTFSGFLLYQD
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgagagagactaagatcatggttcagctgtcaccatctcggactatagagacgttgact
ccctcagagttgaccgtggagaaggaggatggcctggacagccctaaatccgggtcccct
cgagtgctcaccgccctccagctcgcccttaacccggccgcgaccacctactacggctac
gagaagtacatcgaggacggcctcatctgcctcaagcacaagatccgtaacattgagaaa
aagaagctgaaactggaaagctacaatgagaggctggaaaagggggaaaaactaaataaa
gaccaactggatgctgtggggaagtatgaggaggtcatccacaatcttacatttgccaaa
gagctccagaagaccattagtgccctcacacaagatttgttgaaggctcagcggaaggtt
gttcgccaagagaagatcatgaggatcgaacaagagaggaagcgtctgagcttgattctc
caggtgcaatacgtcctccacagtctgcagagagaggacgtccggaggaacttctgcaac
gccagacaacattcccgtcacctgaccacaaaggacacacagagtttgctggatctggca
tcattattgggatgcaaacgagaccataagatgagtttagaggatcagatggaacaggct
gctattgtttactctgagctgctggaagggaaagaaagaccagttgctggctcgacatat
aagcacatgaaggagaagctacttcagctagtggactgtggcttttttgaccacctacca
cttcctaaagttgacattcaagagaagactgaggccgtaaaggctgaccctccatctagg
ccttgtaacctctccacactggtgaagctgagctcaaaagaagtgcctcccaaagagttt
cttaacagacgatacctacctgaaacgaacgtcgctgagcgtagaccggatgagaaggct
tcgccccgtaactggaaggatgactttttggctatgaaggaaagggagccaccggactca
tgggaaatggagctttctgatcctcctgtatcctctcagtcccccatacagaagccatgg
aaaggggcagcaggattgattcccaagactacagacatccttaagagacccacggttgac
cccaaggagaaacgtcaaaagaagaccaaggtggagcaggactccaaatcgactcctgtc
gcagtggaagtctttagttctccatctccgttaccacaagaccctgttcagcgtaaacag
cagctggagactctaatggaccagatctctggctcattcagcttcatgcaggagtctcat
ctggatggagaaacttcacctgtaaacggtcgtgcaaagagatgccgtccatctccaggc
tgctctactcctcttgcacaaagggaactgccaaaaagcccatcagatagtctgcctccg
tcccagctgagcactcctttacagatcctgctgtctggcgagggtaaaggctgtctgtca
aatggagaccattctataaccagctctgacctggatctacaccatgaagataagccacat
aagcaaagtgagggcttcacctctcctccactgtaccgcaggggatcctccatctcagtc
cctctagaaaatcaaggcactgtacaggcaggaaagcagatgttatgcaatggagtatca
acctctgtggttgcgcagacatttacaaccccacctagtcaccgatccatcagtgcagaa
aacaacttccacaacatccactctgtgtttaatgtggcatctttgccaatcagtgagagc
tcggggatgaagtcggatgagagtgggttctctgagtctatgcatctgagttacacgtca
gccaaaacccagagttattccaccgccagcacccagacgccacctgaactcaacctacct
gaagatgacctacagattgaaggccagtaccagctggagtgtccggtcagtacaggtggt
cacgtattctctacccctcagccacagtctcgtctgagtcagtcctgctacccccgtggt
acagcgagaggtatgacgcgtgcaggcaggggtttgggtcactcatacagatcacctggt
ggctacagaggtggttatgaggcctacagagtgaatgtgcgttctccaggagggggcttc
atatcccagacacacagagaccctggatctgccttttatgtgtctagagaaaacgggtat
cagcagagcttcaaacgaggtggaggcacagcaactcaaaggagcaatgctggttggagt
gactcttctcaggtgagcagcccagaccgggagggtgcgtatccgctcgactcaggaatc
agtgacactctctccatcccgccaatggaagtgcccatcacaccccagggcccacacact
atgatgcccgtacacgtgtacccactcaaccaactgcgtgtggctttctccgccgcccgc
gcggccaacttcgcccctggcactctggatcagccgatcgccttcgaactgctgcacacc
aacctcggcgaaatgttcgacacgaccagcggccgtttcacctgtcctgctgccggcact
tacgtcttcatcttccacatcctgaagcttgccatcagcgtgcccctgtacatcaacctc
atgcgcaacgaagaggtgatggtgtccgcgtatgccaatgacggcgctccggaccacgag
actgccagtaatcacgctgtcctccagctgttccagggtgaccaggtgtggctgcggctt
caccgcggcgccatctacggcagcagctggaagtacagcactttctctggtttcttgctg
taccaggactga
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