Rhinichthys klamathensis goyatoka (western speckled dace): 130071210
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Entry
130071210 CDS
T09701
Name
(RefSeq) globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like
KO
K00722
globoside alpha-N-acetylgalactosaminyltransferase [EC:
2.4.1.88
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg00603
Glycosphingolipid biosynthesis - globo and isoglobo series
rkg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
130071210
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rkg01003
]
130071210
Enzymes [BR:
rkg01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.88 globoside alpha-N-acetylgalactosaminyltransferase
130071210
Glycosyltransferases [BR:
rkg01003
]
Glycan extension
FORS blood group (Forssman antigen)
130071210
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_6
Phage_int_SAM_4
Phage_int_SAM_1
PucR
Glyco_tranf_2_4
Motif
Other DBs
NCBI-GeneID:
130071210
NCBI-ProteinID:
XP_056091862
LinkDB
All DBs
Position
Unknown
AA seq
422 aa
AA seq
DB search
MACPVEERSPLTGRGHDLAPTPRALGSTCVGHQRLPVNIPDGLLNTIMQARAPSTRRLYA
SKWSVFSGWCSARNLDPQDCGVSEVLSFLQELLDKGRSPSTLKVYVAAIAAFVKHSHGDN
YKISQLFTTDFVLFLCRLSYNQPSVVGPDGKVVPLTPWLAPVVWEGTFDPTLIDSIYIQQ
NITIATTVFALGKYTQFLKDFLESAEQNYFVGLRVHYYVFTDQPEQVPAVKLSEEHHLTV
LTVPSSNRWQEITLSRMARLEELIESRLVNEADYVFSLDVDTKFYGRWGVETLGRLVGVI
HPGYYQTPREQYPYERRPESQAFIPSSEGDYYYGGAVIGGLVKDVHEVAKTCREQLDIDA
SKSIEAAWQEESHLNKYFLYNKPSKVLSPEYLWQDFKPHTNEVKIIRFSQVIKNYAAVRP
NP
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggcctgtcccgttgaggagagatctcctctcacaggccgggggcacgatttggcaccc
acaccccgagctttgggctctacatgtgtgggccatcaacggctacccgtcaatatcccg
gacgggttgttaaacacgattatgcaagctagagcgccctctactagacggctttatgct
tccaagtggtcagtgttctcaggttggtgctcagctcgcaacctggatccacaagattgt
ggggtatcggaggttctctccttcctacaggagcttttggataagggtagatccccatct
acgctcaaggtgtatgtggcggctattgctgcatttgtcaaacattcacacggagataat
tacaagatatcacaactgttcacaactgattttgttttatttttgtgcaggctttcatac
aatcagcccagtgtagtgggtccagatggcaaagttgttcccttgaccccatggttggcc
ccagttgtatgggaaggaacttttgatcccactttgattgattcaatctacatacaacaa
aacatcaccatagcaactacagtcttcgctcttggaaagtatacacagtttcttaaagat
ttccttgagtctgcagagcagaattactttgttggacttcgtgtgcattattatgtgttc
actgatcaaccagaacaggttcctgcagtaaaactgagtgaagaacatcatctgacggtg
ttgacagtacctagttctaacagatggcaggagatcactttgagcaggatggcaagactg
gaagaactgattgagagtcgattggtcaatgaagccgactatgttttcagccttgatgtg
gatacaaagttctatggtcgctggggggtggagactttgggtcgtctggtaggtgtgata
catcctggttattatcaaacacctcgtgaacaatacccatatgagcgcagaccagagtct
caagcttttattccttcttctgagggtgattattattatggtggggctgtgatcggtggc
ttagtgaaagacgtacatgaggttgctaaaacctgccgggagcagctggacattgatgca
tctaaatccattgaggcagcatggcaggaggagtctcatttgaacaagtacttcctttat
aacaaacccagcaaggtgctctcacccgaatatctgtggcaggactttaaacctcacaca
aacgaggtcaaaatcattcgcttttctcaagttattaaaaactacgctgctgttcgacca
aacccatag
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